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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09365.1
DDBJ      :             transcriptional regulator, GntR family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  486/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.4.5d.190.1
:284 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   53->116 3edpB PDBj 1e-06 39.3 %
:BLT:PDB   124->284 3cnvC PDBj 7e-48 60.5 %
:RPS:PDB   53->284 3eetA PDBj 1e-31 21.4 %
:RPS:SCOP  53->121 1e2xA1  a.4.5.6 * 3e-17 24.6 %
:RPS:SCOP  142->284 2p19A1  d.190.1.2 * 2e-30 28.8 %
:HMM:SCOP  44->133 1v4rA1 a.4.5.6 * 1e-18 37.8 %
:HMM:SCOP  126->283 2fa1A1 d.190.1.2 * 8.5e-35 38.6 %
:RPS:PFM   55->116 PF00392 * GntR 1e-08 46.8 %
:RPS:PFM   142->277 PF07702 * UTRA 2e-21 42.5 %
:HMM:PFM   142->277 PF07702 * UTRA 1.7e-34 36.6 134/141  
:HMM:PFM   53->116 PF00392 * GntR 3.2e-24 50.0 64/64  
:BLT:SWISS 53->267 FRLR_ECO57 3e-20 29.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09365.1 GT:GENE ABF09365.1 GT:PRODUCT transcriptional regulator, GntR family GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2700495..2701349) GB:FROM 2700495 GB:TO 2701349 GB:DIRECTION - GB:PRODUCT transcriptional regulator, GntR family GB:PROTEIN_ID ABF09365.1 GB:DB_XREF GI:93355276 InterPro:IPR000524 InterPro:IPR011663 LENGTH 284 SQ:AASEQ MSSLPTSLPAAAANGAPESGAPQSGAGTQPSTNAPGAAVAPATAAPSPTFSPLYQQIKALIMQSLQTGEWKPGEMIPSEMDLAARYKVSQGTVRKAIDELAAENLVARRQGKGTFVTTHYEDVVKFRFLRLVPDEGEPHYGSSRVLECKRLRAPAEIARLLDIRTGDSVVQIRRVLTFSNEATVLDEIWLLGANFKGLTAEKLNEWKGPMYALFEGEFGTRMIRATEKIRAVVADDTAAELLSVAPGSPLLSVERVSFTYGDRPVEVRRGLYVTTRHYYQNDLS GT:EXON 1|1-284:0| BL:SWS:NREP 1 BL:SWS:REP 53->267|FRLR_ECO57|3e-20|29.6|206/243| SEG 10->22|aaaangapesgap| SEG 31->52|stnapgaavapataapsptfsp| BL:PDB:NREP 2 BL:PDB:REP 53->116|3edpB|1e-06|39.3|61/214| BL:PDB:REP 124->284|3cnvC|7e-48|60.5|157/158| RP:PDB:NREP 1 RP:PDB:REP 53->284|3eetA|1e-31|21.4|224/238| RP:PFM:NREP 2 RP:PFM:REP 55->116|PF00392|1e-08|46.8|62/64|GntR| RP:PFM:REP 142->277|PF07702|2e-21|42.5|134/141|UTRA| HM:PFM:NREP 2 HM:PFM:REP 142->277|PF07702|1.7e-34|36.6|134/141|UTRA| HM:PFM:REP 53->116|PF00392|3.2e-24|50.0|64/64|GntR| GO:PFM:NREP 6 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00392|IPR000524| GO:PFM GO:0005622|"GO:intracellular"|PF00392|IPR000524| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00392|IPR000524| GO:PFM GO:0003677|"GO:DNA binding"|PF07702|IPR011663| GO:PFM GO:0030528|"GO:transcription regulator activity"|PF07702|IPR011663| GO:PFM GO:0045449|"GO:regulation of transcription"|PF07702|IPR011663| RP:SCP:NREP 2 RP:SCP:REP 53->121|1e2xA1|3e-17|24.6|69/73|a.4.5.6| RP:SCP:REP 142->284|2p19A1|2e-30|28.8|139/148|d.190.1.2| HM:SCP:REP 44->133|1v4rA1|1e-18|37.8|90/0|a.4.5.6|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 126->283|2fa1A1|8.5e-35|38.6|153/0|d.190.1.2|1/1|Chorismate lyase-like| OP:NHOMO 1379 OP:NHOMOORG 487 OP:PATTERN -------------------------------------------------------------------- 121262-31121--211----4--15-----1523212433-1-122--11-333--3--232152627511------2---4-------------------------1------------------------------1-------------------------------------------331-----1-23333224413333336433343322362325766775-3-1111111111111-1--1-513-26-14134422533132122211112222111122222222212222222221222121111222211-34111112131424--2333--11-2----34----4--1-1111---1-4221-------212--1---1-22222221225---1--1-211--52243313344521-1123411-1333--------1111--11-------------------------------1-1-1985688888845455779666664597A9A9411664132111242543211-1142----------111-22---11-----2------1-11----1------------------------------23112-1131-------11-1-------11------1------5333-325554542466-55565326565444454444741-11-6344564666566655354334452-333243333344---1-----------334---1-----------333331--22-16646434233223-224----------1111111-1122----21211222---------------------------------------------------22--15-1-1-- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------5---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 232 STR:RPRED 81.7 SQ:SECSTR ####################################################HHHHHHHHHHHHHHHTcccTTcccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEcccEEEccccccEEEEccccccccccHHHHHccEEEEEEEEEEEccHHHHHHHTccTTcEEEEEEEEEEEEETTEEEEEEEEEHHHHTTccHHTTcTTccTTcHHHHHHTTccccEEEEEEEEEEccHHHHHHHTccTTcEEEEEEEEEEETTTEEEEEEEEEEETTTEEEEcccc DISOP:02AL 1-6,8-35| PSIPRED cccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEcccEEEEccccccHHHHHHHHHHHHHHcccccEEEEEEEEcccccHHHHHHHccccccHHHHHHHHHHHccEEEEEEEEcccHHHHccccHHHHHHccccHHHHHHHHHcccEEEEEEEEEEEEccHHHHHHcccccccEEEEEEEEEEccccEEEEEEEEEEcccEEEEEEEcc //