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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09415.1
DDBJ      :             porin, Gram-negative type
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  59/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
f.4.3
:382 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   23->382 2fgrA PDBj 5e-14 29.0 %
:RPS:PDB   23->382 1e54A PDBj 2e-30 24.2 %
:RPS:SCOP  23->382 1e54A  f.4.3.1 * 7e-48 26.8 %
:HMM:SCOP  14->382 1hxxA_ f.4.3.1 * 9.5e-72 41.7 %
:RPS:PFM   50->343 PF00267 * Porin_1 3e-16 33.5 %
:HMM:PFM   64->343 PF00267 * Porin_1 1.8e-09 23.8 239/336  
:BLT:SWISS 23->357 OMP_BORPE 2e-20 37.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09415.1 GT:GENE ABF09415.1 GT:PRODUCT porin, Gram-negative type GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 2763333..2764481 GB:FROM 2763333 GB:TO 2764481 GB:DIRECTION + GB:PRODUCT porin, Gram-negative type GB:PROTEIN_ID ABF09415.1 GB:DB_XREF GI:93355326 InterPro:IPR001702 InterPro:IPR002299 LENGTH 382 SQ:AASEQ MKRKFLTLAALAPAAVTAHAQTSVTLYGVIDGSVEYVNRVAAGAATPTQGGSRFGMPSVGGLSASRWGLRGVEDLGAGNSAMFVLESGFQWDSGALQSAPLFNRQSYIGLQNKEYGKLSFGRQYTSFFDGMANFAPLRFAATYEPGIWWMGLNYREDNMVKYTGQFGPLQAVGHFSFGTGTAVQNANIVLANGGVGETPGNFTDNTAYGGSLMYLDSSGLGFSVAADIWRPAAVTGQPGRVNKYGAAALYNTGPFKFTAGYRYNKGEFSNGATVLRDDYWWAGINYQATPALGLSLAYYYADIKSARTAATSPETNPANMQQVSFIADYNFSKRTDVYLSVGYAHNGGLSFDSTATAFAFKYPTMTGQQNMVGVTVGVRQVF GT:EXON 1|1-382:0| BL:SWS:NREP 1 BL:SWS:REP 23->357|OMP_BORPE|2e-20|37.7|300/385| SEG 6->22|ltlaalapaavtahaqt| BL:PDB:NREP 1 BL:PDB:REP 23->382|2fgrA|5e-14|29.0|328/332| RP:PDB:NREP 1 RP:PDB:REP 23->382|1e54A|2e-30|24.2|330/331| RP:PFM:NREP 1 RP:PFM:REP 50->343|PF00267|3e-16|33.5|275/306|Porin_1| HM:PFM:NREP 1 HM:PFM:REP 64->343|PF00267|1.8e-09|23.8|239/336|Porin_1| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00267|IPR001702| GO:PFM GO:0006810|"GO:transport"|PF00267|IPR001702| GO:PFM GO:0016020|"GO:membrane"|PF00267|IPR001702| RP:SCP:NREP 1 RP:SCP:REP 23->382|1e54A|7e-48|26.8|328/332|f.4.3.1| HM:SCP:REP 14->382|1hxxA_|9.5e-72|41.7|321/0|f.4.3.1|1/1|Porins| OP:NHOMO 1106 OP:NHOMOORG 61 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------35536ZjnihePPMNIddoeUTSOBR*V*EWMR11GFH15321E84353331-----------------1-------------------------11-1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------2-----------------------------6---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 360 STR:RPRED 94.2 SQ:SECSTR ######################cEEEEEEEEEEEEEEcccTTcccEEEEEETcccccccccccccEEEEEEEEEEETTEEEEEEEEEEccTTTTcTTccTccccEEEEEEEETTTEEEEEccEEcHHHHHHGGGcTTTTcccccccccccTTccccTTTTccEETTEEEEEccccTTETEEcEEEEEEEEEccTTcccTTcccTTcEEEEEEEEEEETTEEEEEEEEEEEEEETTEEcEEEEEEEEEEEEEccccEEEEEEEEEEEEETTccEEcEEEEEEEEEEEEccccEEEEEEEEEEEEGGGTEEEETTTEEEEEEEEEEEEEEEEccccEEEEEEEEEEEEcTTcccccccTTTccccccTTccEEEEEEEEEEEEc DISOP:02AL 1-1,46-47,51-52| PSIPRED cccEEEEEEccccEEEEEccccEEEEEEEEEEEEEEEEcccccccccccccccEEEEEcccccccEEEEEEEEEEcccEEEEEEEEEEEEcccccccccccEEEEEEEEEEcccEEEEEEcccccEEEEEEEccccccccccccccccccccccEEEEEEEEccccccEEEEEEEEEEcccccccccccEEcccccccccccccccEEEEEEEccccccccEEEEEEEccccccccccccEEEEEEEEEEEEccEEEEEEEEEEEccccccccEEEEEEEEEEEEEEccccEEEEEEEEEEEEEccccccccccccccccEEEEEEEEEcccccEEEEEEEEEEEEcccccccEEEEEEcccccccccccEEEEEEEEEEcc //