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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09450.1
DDBJ      :             Auxin Efflux Carrier
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  55/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:293 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   148->288 PF03547 * Mem_trans 5e-07 32.4 %
:HMM:PFM   6->144 PF03547 * Mem_trans 4.6e-07 20.3 138/385  
:HMM:PFM   148->286 PF03547 * Mem_trans 4.1e-15 25.2 139/385  
:BLT:SWISS 148->281 PIN6_ARATH 7e-08 27.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09450.1 GT:GENE ABF09450.1 GT:PRODUCT Auxin Efflux Carrier GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2797793..2798674) GB:FROM 2797793 GB:TO 2798674 GB:DIRECTION - GB:PRODUCT Auxin Efflux Carrier GB:PROTEIN_ID ABF09450.1 GB:DB_XREF GI:93355361 InterPro:IPR004776 LENGTH 293 SQ:AASEQ MFTRIVSIITPVILIILIGWLYGRRAHPDMTGINRATLEVIAPLLVVSAFISKDFVLADQLVLLACAVAVVIGSGVLAWLVARMIGANPRTFVPPMMFNNCGNMGLPLSVFAFGPAGLAPAVALFAASNLMHFTVGMKIVNRQASMAQIARNPMVLATVAGVALSLAKPYFTLPEPVYESIKLLGDATVPLMLFALGVRMKDVSLRNWGMGVLGAAVCPLAGIVVALGLAWWVPMTDLQRGLLFVFAALPPAVLNFLVADHFRQEPDQVASIVLLGNIAAVVFVPIGLYLGLK GT:EXON 1|1-293:0| BL:SWS:NREP 1 BL:SWS:REP 148->281|PIN6_ARATH|7e-08|27.5|131/570| TM:NTM 8 TM:REGION 2->23| TM:REGION 32->54| TM:REGION 62->84| TM:REGION 110->132| TM:REGION 151->173| TM:REGION 210->232| TM:REGION 240->262| TM:REGION 269->290| SEG 5->18|ivsiitpviliili| SEG 56->71|vladqlvllacavavv| SEG 110->127|vfafgpaglapavalfaa| RP:PFM:NREP 1 RP:PFM:REP 148->288|PF03547|5e-07|32.4|139/305|Mem_trans| HM:PFM:NREP 2 HM:PFM:REP 6->144|PF03547|4.6e-07|20.3|138/385|Mem_trans| HM:PFM:REP 148->286|PF03547|4.1e-15|25.2|139/385|Mem_trans| GO:PFM:NREP 2 GO:PFM GO:0016021|"GO:integral to membrane"|PF03547|IPR004776| GO:PFM GO:0055085|"GO:transmembrane transport"|PF03547|IPR004776| OP:NHOMO 60 OP:NHOMOORG 58 OP:PATTERN ---------------------------11---------------1----------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------11------------111111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-----111-------------1-1-----------------------------1----------------------------------1111----------------11------1----------111------------------1----1-----------------------------------1-1-1-----------------------------1-1---------------------------------------------------------------------------------------------------------22--------------------------11-11-----1111-----------------11111111111------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcc //