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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09513.1
DDBJ      :             thioredoxin
Swiss-Prot:             

Homologs  Archaea  37/68 : Bacteria  875/915 : Eukaryota  175/199 : Viruses  0/175   --->[See Alignment]
a.118.8c.47.1
:280 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->104 2gzyA PDBj 6e-23 45.8 %
:BLT:PDB   172->279 2r5sA PDBj 4e-06 29.0 %
:RPS:PDB   1->105 2eiqA PDBj 2e-25 38.8 %
:RPS:SCOP  4->105 1qgvA  c.47.1.8 * 4e-25 10.9 %
:HMM:SCOP  5->108 2trcP_ c.47.1.6 * 1.7e-36 44.1 %
:HMM:SCOP  104->244 1ihgA1 a.118.8.1 * 1.2e-05 29.5 %
:RPS:PFM   5->102 PF00085 * Thioredoxin 2e-24 52.1 %
:HMM:PFM   4->104 PF00085 * Thioredoxin 3.8e-28 43.4 99/104  
:HMM:PFM   115->142 PF07719 * TPR_2 0.00019 32.1 28/34  
:BLT:SWISS 9->104 THIO_PASMU 3e-26 52.1 %
:PROS 23->41|PS00194|THIOREDOXIN_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09513.1 GT:GENE ABF09513.1 GT:PRODUCT thioredoxin GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 2872719..2873561 GB:FROM 2872719 GB:TO 2873561 GB:DIRECTION + GB:PRODUCT thioredoxin GB:PROTEIN_ID ABF09513.1 GB:DB_XREF GI:93355424 InterPro:IPR005746 InterPro:IPR006662 InterPro:IPR006663 LENGTH 280 SQ:AASEQ MSDVTLQNFEADVIEMSRQVPVLVDFWAPWCGPCRTLGPMLEKLEAESGGKWRLAKVNVDENQELAAHFGVRSIPHVVAFADGQAVDQFIGVLPESQLREFLDRLTPNPGELALREAVELAAAGDREAAQASFQAALAYDPGADTARLTYIGFLLDGNKIADAETEFGLLSPRAAQEDAYAALQTRLEAMKGVGDLPDGADLKARVAANPADLPARLDLAHVLIARREYEAALEQLLEIVRSDRWFEDDVGRKTMLSVFELMGDDPAVSRWRRQLATVLN GT:EXON 1|1-280:0| BL:SWS:NREP 1 BL:SWS:REP 9->104|THIO_PASMU|3e-26|52.1|94/106| PROS 23->41|PS00194|THIOREDOXIN_1|PDOC00172| SEG 111->123|elalreavelaaa| SEG 128->138|aaqasfqaala| BL:PDB:NREP 2 BL:PDB:REP 5->104|2gzyA|6e-23|45.8|96/104| BL:PDB:REP 172->279|2r5sA|4e-06|29.0|107/170| RP:PDB:NREP 1 RP:PDB:REP 1->105|2eiqA|2e-25|38.8|103/107| RP:PFM:NREP 1 RP:PFM:REP 5->102|PF00085|2e-24|52.1|96/103|Thioredoxin| HM:PFM:NREP 2 HM:PFM:REP 4->104|PF00085|3.8e-28|43.4|99/104|Thioredoxin| HM:PFM:REP 115->142|PF07719|0.00019|32.1|28/34|TPR_2| GO:PFM:NREP 1 GO:PFM GO:0045454|"GO:cell redox homeostasis"|PF00085|IPR013766| RP:SCP:NREP 1 RP:SCP:REP 4->105|1qgvA|4e-25|10.9|101/130|c.47.1.8| HM:SCP:REP 5->108|2trcP_|1.7e-36|44.1|102/0|c.47.1.6|1/1|Thioredoxin-like| HM:SCP:REP 104->244|1ihgA1|1.2e-05|29.5|88/0|a.118.8.1|1/1|TPR-like| OP:NHOMO 2424 OP:NHOMOORG 1087 OP:PATTERN ------232222222221-----225323123-----11----2212223212--------11---22 1123532233323232234-35223233333264442374322223123322243232--3323332545411111111111311222555415221--21122133222111111111111111331332333334223311231545655634332222224341776611111111111122222--12111111112111121111111111111111111222222221111111111111111111111212213111222212322321111111111121111111111111111111111111121111111111-122111111131312221221211113121111221111422211-11212322511111323232223233222222222223-243234323421222222222242222322222222223222222223222223211111111111111111111111111111-2333122222222233413323322222223222222211432323433333321116311221111111112233132312222211111111222211443457212111111111112111111121233443322325331322222222222322223211-1222411-11133333333333333233-33333333233333333333334422233233333333333333233333311333333333333111122222222232422222212111111111212121222232222233333333322222222222225333433333333332233433222222223512211111--1-111111---1--1-1--11---11-1-1111----------221 ----122-----1111214265454622233234311222122111-12262332321211112212-221-3232111-11111123-33222233342112231-2A471734421--111132-228E3-224-21122121-312-21-3-311331133332724224544645*56566B88I3865532113 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 278 STR:RPRED 99.3 SQ:SECSTR EEEccGGGccccccccccTcEEEEEEEcTTcHHHHHHHHHHHHHHHHTTTTcEEEEEETTTcTTHHHHTTcccccEEEEEETTEEEEEEEccccHHHHHHHHHHHcHcTcHHHHTTTccHHHHHHHHTcHHHHHHHHHHHHHHHHTTcccccEEEETTTEEccGGGcccccHHHHHHHHHHHHHHHHTHHHHHTccHHHHHHHHHHHHcTTcHHHHHHHHHHHHHTTcHHHHHHHHHHHHTTcTTTTTTHHHHH#HHHHHHHccccHHHHHHHHHHHHc# DISOP:02AL 280-281| PSIPRED cccccHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHHHHHHcccEEEEEEEccccHHHHHHcccccccEEEEEEccEEEEEEEccccHHHHHHHHHHHHccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHc //