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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09570.1
DDBJ      :             Lytic transglycosylase, catalytic
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  60/915 : Eukaryota  1/199 : Viruses  1/175   --->[See Alignment]
d.2.1
:355 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   204->276 1slyA PDBj 3e-06 40.8 %
:RPS:PDB   197->307 132lA PDBj 1e-14 17.1 %
:RPS:SCOP  211->283 1xsfA1  d.2.1.8 * 1e-12 13.7 %
:HMM:SCOP  197->321 1qsaA2 d.2.1.6 * 1.3e-21 33.6 %
:RPS:PFM   202->283 PF01464 * SLT 8e-04 34.1 %
:HMM:PFM   207->290 PF01464 * SLT 8.4e-18 32.1 84/121  
:HMM:PFM   161->212 PF11251 * DUF3050 0.00095 26.9 52/232  
:BLT:SWISS 209->306 VP07_BPPRD 1e-11 39.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09570.1 GT:GENE ABF09570.1 GT:PRODUCT Lytic transglycosylase, catalytic GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2928066..2929133) GB:FROM 2928066 GB:TO 2929133 GB:DIRECTION - GB:PRODUCT Lytic transglycosylase, catalytic GB:PROTEIN_ID ABF09570.1 GB:DB_XREF GI:93355481 InterPro:IPR008258 LENGTH 355 SQ:AASEQ MSGWKTLHLPGIGRALQVRFRQPVPGVSRALQVRLAHPVAGRALLRGGRTTLKYTLNSLGVLSVAAAVTLTVSQQWRTSLAGALAGNEAPAVLVDAAVSKDSISHVPPMSADVAASRLVAAVASHGSSGLPTVSGVDEWSQTAAGKVPSVAHLAAQIPVQRVALDARNTAALGSAREQAAVAEYIARKYRVATQATAQLVKAAYMTGREVGIDPLLILGVIAIESSFNPYAESGVGAQGLMQVMTKVHQDKYEAVGGVSAALNPYANIKIGALVLKDCIARAGSIEGGLKYYVGATTNTDGGYGAKVLAERARLRALLGLPNTEKAPGVSDTKTQAEHHQGTEKLEASGNTAQSA GT:EXON 1|1-355:0| BL:SWS:NREP 1 BL:SWS:REP 209->306|VP07_BPPRD|1e-11|39.8|93/265| SEG 58->73|slgvlsvaaavtltvs| SEG 110->124|sadvaasrlvaavas| SEG 308->320|laerarlrallgl| BL:PDB:NREP 1 BL:PDB:REP 204->276|1slyA|3e-06|40.8|71/618| RP:PDB:NREP 1 RP:PDB:REP 197->307|132lA|1e-14|17.1|111/124| RP:PFM:NREP 1 RP:PFM:REP 202->283|PF01464|8e-04|34.1|82/113|SLT| HM:PFM:NREP 2 HM:PFM:REP 207->290|PF01464|8.4e-18|32.1|84/121|SLT| HM:PFM:REP 161->212|PF11251|0.00095|26.9|52/232|DUF3050| RP:SCP:NREP 1 RP:SCP:REP 211->283|1xsfA1|1e-12|13.7|73/86|d.2.1.8| HM:SCP:REP 197->321|1qsaA2|1.3e-21|33.6|125/168|d.2.1.6|1/1|Lysozyme-like| OP:NHOMO 76 OP:NHOMOORG 62 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------1111122222221111221111111123211111111211111111111111----------------111-----------111--------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1 STR:NPRED 145 STR:RPRED 40.8 SQ:SECSTR ##################################################################################################################################################################cccHHHHGGGTcccccHHHHHccccTccccEHHHHHHHHHHHTTcTTcTTccHHHHHHHHHHHTTcTTcEEccEEETTTTEETTTTccccccTTcccTTcccGGGGGccccHHHHHHHHHHHTccGGGGcHHHHHHTTccGGGGG################################################ DISOP:02AL 1-2,328-339,348-356| PSIPRED cccccEEEccccccEEEEEEcccccccHHHHHHEEccccHHHHHHHcccHHHHHHHHHHHHHHHHHHEEEEEcHHHHHHHHHHHccccccccccccccccHHHcccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccccccEEEEEEccHHHHHHHHHcccHHHHccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccHHcHHHHHHHHHHHHHHHHHHccccHHHcccccccccHHHHHccccEEEEEccccccc //