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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09587.1
DDBJ      :             Three-deoxy-D-manno-octulosonic-acid transferase-like protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  506/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
c.55.1c.87.1
:424 amino acids
:SECSTR
:PSIPRED
:RPS:PDB   52->405 3dzcA PDBj 3e-07 10.2 %
:RPS:SCOP  323->409 2nrhA2  c.55.1.13 * 2e-10 26.7 %
:HMM:SCOP  52->423 1f6dA_ c.87.1.3 * 1.3e-06 21.6 %
:RPS:PFM   36->212 PF04413 * Glycos_transf_N 6e-38 51.1 %
:HMM:PFM   31->214 PF04413 * Glycos_transf_N 2e-70 47.3 182/186  
:HMM:PFM   296->400 PF00534 * Glycos_transf_1 5.1e-05 23.5 102/172  
:BLT:SWISS 24->358 KDTA_ECOLI 4e-60 43.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09587.1 GT:GENE ABF09587.1 GT:PRODUCT Three-deoxy-D-manno-octulosonic-acid transferase-like protein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2946890..2948164) GB:FROM 2946890 GB:TO 2948164 GB:DIRECTION - GB:PRODUCT Three-deoxy-D-manno-octulosonic-acid transferase-like protein GB:PROTEIN_ID ABF09587.1 GB:DB_XREF GI:93355498 InterPro:IPR007507 LENGTH 424 SQ:AASEQ MLRFVYSLLWLLILPLALLRLVWRSRKESGYIQHVGERLGRYGDLSAAGPWLWVHAVSVGETRAAQPLIDALLAAYPRHRLLLTHMTPTGRQTGAQLYGANPRVQQCYLPYDLPWLVRRFLAYFQPDAGLIMETEVWPNLVHVTRRMGVPLFLVNARLSPRSYRRTARFGGAAAALYNDFTMVLAQTAGDAERYRALGVKSVQVTGNLKFDMQPPEAGVARGQLLRQAFGNRHVLAAASTREGEEPLILEAFSRWPGTDRPALLLVPRHPQRFDEVAAMATRAGFSVQRRSALDIEQLSAPITADVVLGDSMGEMAMYYAASDIAYIGGSLIPLGGQNLIEACAVGTPVLMGPHTFNFAQATEDAIAAGACQRVADADELMVAAAAILGDATRLADMREHALTFAGLHRGATARTLGALAPVLR GT:EXON 1|1-424:0| BL:SWS:NREP 1 BL:SWS:REP 24->358|KDTA_ECOLI|4e-60|43.0|328/425| TM:NTM 1 TM:REGION 2->24| SEG 8->21|llwllilplallrl| SEG 164->175|rrtarfggaaaa| SEG 374->386|vadadelmvaaaa| RP:PDB:NREP 1 RP:PDB:REP 52->405|3dzcA|3e-07|10.2|343/373| RP:PFM:NREP 1 RP:PFM:REP 36->212|PF04413|6e-38|51.1|174/183|Glycos_transf_N| HM:PFM:NREP 2 HM:PFM:REP 31->214|PF04413|2e-70|47.3|182/186|Glycos_transf_N| HM:PFM:REP 296->400|PF00534|5.1e-05|23.5|102/172|Glycos_transf_1| GO:PFM:NREP 3 GO:PFM GO:0005529|"GO:sugar binding"|PF04413|IPR007507| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF04413|IPR007507| GO:PFM GO:0016740|"GO:transferase activity"|PF04413|IPR007507| RP:SCP:NREP 1 RP:SCP:REP 323->409|2nrhA2|2e-10|26.7|86/117|c.55.1.13| HM:SCP:REP 52->423|1f6dA_|1.3e-06|21.6|328/0|c.87.1.3|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 518 OP:NHOMOORG 512 OP:PATTERN -------------------------------------------------------------------- 111--------------------------------------------------------------------------------1-1111111-111---111111111-111111111111111111111111111------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------11111111-11111-11111111111111111111111-1111111111111111111111111111111111111111111111111111111------------1111111111111----1-----11111111111111111111111111111111111111111111111111111111111111111---11112122111--1111111111111111111--2111111111111111111111111111111111111111111111111111111111--11111------11111111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111221111111111111111111111111111111--11------------------------------------------------111 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-11-11--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 354 STR:RPRED 83.5 SQ:SECSTR ###################################################EEEEEccHHHHHHHHHHHHHHHHcTTEEEEEEEcccccHHHHHHHHHTTccccEEcccccTTccHHHHHHHHHHHHHHHHHHHcccEEEEEHHHTTTccEEEETcccccccTTccTTHHHHHHHHHHTccEEEEccHHHHHHHHHTTccGGGEEEcccHHHHHHHHHHHHHHHcHHHHHHHHHTcTTccTTcEEEEEEcccccccTTHHHHHHHHHHHHHHcTTEEEEEEccccHHHHHHHHHHTTTcTTEEEEccccHHHHHHHHHHccEcEEEEccHEEEcccGGGTTGGGGTccEEEcccccccHHHHHHHHHTcEEEcTTcHHHHHHHHHHHHHcHHHHHHHHTcccTTc################### PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccccccEEEEEEccHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHccccEEEEEccccHHHHHHHHHHcHHHHHHHHcccEEEEccHHHHHHHHHcccccEEEEcccccccccccccHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHccccEEEEcccccccccccccccEEEEEcHHHHHHHHHHccEEEEcccccccccccHHHHHHHcccEEEccccccHHHHHHHHHHcccEEEEEcHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //