[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09588.1
DDBJ      :             Lipopolysaccharide heptosyltransferase I
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  206/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:363 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   33->336 2h1hA PDBj 5e-43 36.4 %
:RPS:SCOP  33->335 1pswA  c.87.1.7 * 5e-37 22.8 %
:HMM:SCOP  32->360 1pswA_ c.87.1.7 * 1.9e-60 34.5 %
:RPS:PFM   112->323 PF01075 * Glyco_transf_9 2e-12 34.5 %
:HMM:PFM   107->340 PF01075 * Glyco_transf_9 4e-42 32.1 224/247  
:BLT:SWISS 33->337 RFAC_SALTY 3e-42 37.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09588.1 GT:GENE ABF09588.1 GT:PRODUCT Lipopolysaccharide heptosyltransferase I GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2948164..2949255) GB:FROM 2948164 GB:TO 2949255 GB:DIRECTION - GB:PRODUCT Lipopolysaccharide heptosyltransferase I GB:PROTEIN_ID ABF09588.1 GB:DB_XREF GI:93355499 InterPro:IPR002201 InterPro:IPR011908 LENGTH 363 SQ:AASEQ MRSSRSDVVQVSNQETPSPQAAVSPFGLPARPRILIVKVSSLGDVVHNMPLVHDLRARWPDAEIDWVVEEGYVDLVRLLPDVGRVIPFALRRWRKRFWRGETWAEIGALRDAIRARPYDAVLETQGLLKTAIVARTAARVAGAPVIGLGNATQGSGYEPAARLFYTAPVKVPRQTHSVRRSRLLGAALTGITPPEPPRFFGPAANTLSVDDPLWADLPARYAVCFHATAGAKKRWAVENWHALGRRLEAEGLTVLLPWGSEAERRDAEALAAGIPGARVLPRFSVMQGFGLINRAEVVIGVDTGLVHIAAALCRPTVEIYTATWRWKTEGYWSDRIANVGDDGIVPTVDEVHDAAIRVRGVTA GT:EXON 1|1-363:0| BL:SWS:NREP 1 BL:SWS:REP 33->337|RFAC_SALTY|3e-42|37.2|290/317| SEG 130->143|taivartaarvaga| SEG 261->272|eaerrdaealaa| BL:PDB:NREP 1 BL:PDB:REP 33->336|2h1hA|5e-43|36.4|291/322| RP:PFM:NREP 1 RP:PFM:REP 112->323|PF01075|2e-12|34.5|200/237|Glyco_transf_9| HM:PFM:NREP 1 HM:PFM:REP 107->340|PF01075|4e-42|32.1|224/247|Glyco_transf_9| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF01075|IPR002201| GO:PFM GO:0016740|"GO:transferase activity"|PF01075|IPR002201| RP:SCP:NREP 1 RP:SCP:REP 33->335|1pswA|5e-37|22.8|276/331|c.87.1.7| HM:SCP:REP 32->360|1pswA_|1.9e-60|34.5|310/0|c.87.1.7|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 234 OP:NHOMOORG 206 OP:PATTERN -------------------------------------------------------------------- 11--------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------11---------------11111111---------------------1--------------11----------------------------------------------------------------111112222221222222222222222222122111121-----111----1-111111111111---111---------------111211111-------1--------------------1----11--1-----------------------------1----------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111111----------111--111--1------111----------1111111111111111111---------1------------------------------1------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 291 STR:RPRED 80.2 SQ:SECSTR ################################EEEEEccccHHHHHTTHHHHHHHHHHcTTcEEEEEEEGGGTHHHHTcTTEEEEEEEcHHHHHTTTTcHHHHHHHHHHHHHHHcccccEEEEccccHHHHHHTGGGccc#####cEEEEcTT#TcccGGGGGGccEEEcccccccHHHHHHHHHHHHHTccccccccccccTHHHHT#######TccTcEEEEEcccccGGGcccHHHHHHHHHHHGGGTcEEEEccccHHHHHHHHHHHTTcTTEEEcccccHHHHHHHHHTcccEEEEccHHHHHHHHTTccEEEEEccccHHHHccccTTEE########################### DISOP:02AL 1-6,8-10,362-364| PSIPRED ccccHHHHHHccccccccccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHccccccEEEEEccccccccccccccHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHcccEEEcccccccccccccHHHHHHcccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccccccEEEEEcccccHHHcccHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHccccEEEEccccHHHHHHHHHcccEEEEccHHHHHHHHHccccEEEEEccccHHHccccccccEEEEccccccccHHHHHHHHHHHHcccc //