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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09596.1
DDBJ      :             polysaccharide biosynthesis protein CapD
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  484/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
b.53.1c.2.1
:649 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   286->582 2gn4B PDBj 4e-29 33.1 %
:RPS:PDB   212->579 1e2uA PDBj 2e-30 14.0 %
:RPS:SCOP  286->445 1arzA1  c.2.1.3 * 1e-12 12.2 %
:RPS:SCOP  467->593 1feuA  b.53.1.1 * 2e-31 9.9 %
:HMM:SCOP  145->276 1xcbA2 c.2.1.12 * 5.6e-22 37.3 %
:HMM:SCOP  285->633 1udbA_ c.2.1.2 * 6.7e-45 31.9 %
:RPS:PFM   287->595 PF02719 * Polysacc_synt_2 8e-91 60.6 %
:HMM:PFM   287->596 PF02719 * Polysacc_synt_2 1.7e-122 57.4 291/296  
:BLT:SWISS 119->579 EPSC_BACSU 2e-86 43.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09596.1 GT:GENE ABF09596.1 GT:PRODUCT polysaccharide biosynthesis protein CapD GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2957898..2959847) GB:FROM 2957898 GB:TO 2959847 GB:DIRECTION - GB:PRODUCT polysaccharide biosynthesis protein CapD GB:PROTEIN_ID ABF09596.1 GB:DB_XREF GI:93355507 InterPro:IPR001509 InterPro:IPR002198 InterPro:IPR003869 InterPro:IPR013120 LENGTH 649 SQ:AASEQ MKNLTVPLLALPRSAKRVVVVALDLILALVSVWVAFYLRIDQTGLPILQQEYVYFLSPLLAFPIFVRMGLYRAIFRYTGMAALASTAKAVGLYGVLFFSALLLLKLDGVPRSIGLIQPMLFLLLVGASRALARFWLAGTAAKVRAHEGRLLIYGAGDAGVQTASALAVTHQFVLLGFIDDDRAKIGRTINGLDIFGPDDVPEAVERMGVTDILLAIPSMGRAQRNAVIDKLRALPVHVRTLPGMVDLASGRVTIRDLQELDIEDLLGRAPVPPDAALLAKNLADKTVLVTGAGGSIGSELCRQIMLERPRRLVLVEHNEFGLYSIHQELERLRDEHRLQTEVVPLLASVVNLRRLREICGLYRPATVYHAAAYKHVPLVECNAAEGVMNNVFGTLNMARAAMESQAEYFVLVSTDKAVRPTNVMGASKRMAELVLQAMAARQSVDFGLLDVESEEAVPNRTVFAMVRFGNVLGSSGSVVPLFRRQLLEGGPLTVTHEKVTRYFMTIPEAAQLVLQAGAMAHGGEVFVLDMGQPVKIMDLARRMVQLSGMTVCDDQHPDGDIEIRVTGLRPGEKLYEELLIGDNPEGTAHERIMKAREDYVPWPEFAPVLASMRVAAEQSDEKQIKEILGRQVHGYGPQAEGKAANALLV GT:EXON 1|1-649:0| BL:SWS:NREP 1 BL:SWS:REP 119->579|EPSC_BACSU|2e-86|43.3|432/598| TM:NTM 4 TM:REGION 10->32| TM:REGION 50->72| TM:REGION 82->104| TM:REGION 113->135| SEG 18->32|vvvvaldlilalvsv| SEG 92->106|lygvlffsallllkl| SEG 274->285|daallaknladk| BL:PDB:NREP 1 BL:PDB:REP 286->582|2gn4B|4e-29|33.1|257/327| RP:PDB:NREP 1 RP:PDB:REP 212->579|1e2uA|2e-30|14.0|328/552| RP:PFM:NREP 1 RP:PFM:REP 287->595|PF02719|8e-91|60.6|287/291|Polysacc_synt_2| HM:PFM:NREP 1 HM:PFM:REP 287->596|PF02719|1.7e-122|57.4|291/296|Polysacc_synt_2| GO:PFM:NREP 1 GO:PFM GO:0009058|"GO:biosynthetic process"|PF02719|IPR003869| RP:SCP:NREP 2 RP:SCP:REP 286->445|1arzA1|1e-12|12.2|148/160|c.2.1.3| RP:SCP:REP 467->593|1feuA|2e-31|9.9|121/185|b.53.1.1| HM:SCP:REP 145->276|1xcbA2|5.6e-22|37.3|126/0|c.2.1.12|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 285->633|1udbA_|6.7e-45|31.9|276/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 690 OP:NHOMOORG 499 OP:PATTERN ---------------------------1----1---11-1--1----1-1---1-----1-------2 -21-1--111-------------------------------111---2---1---1-2----1--1-------------12-1---1-6434-8-----121221211-2--------------1----11-121-11132-----1-----1----11-1-1------3--111111-11--1----11---3-----21--12-12--12221-13---1122------111222222221222212--21------------------1--------------1--21111121111-------------1--------1-11122221221222-122211-22311-121211321311----1--2----2222-------11132-1121111111111111-1112121111--1---11221111--2121-21111---1111111111111212------------1111111111111-----1-11-111131111111111111121111111111111--2-111-1--21111222111111111111111141222221111-12----2221212211-21--222222222221211111111112111--22-11-2221222--32-11-111221213---13----------11--------------------------------------21--1---------------------1-----------------------1111111-2---1-1-----1--2111-1-11111111212222212121111211111111-33221111112122111111111111111-11222222--------112-------------------------1121111111--- -------------2---------------------------------------------------------------------------------------------------------------------------------------------------------------2--------------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 436 STR:RPRED 67.2 SQ:SECSTR ######################################################################################################################################################################################################HHHHHHTcTTccEHHHHHHHHHTTcccHHHHHHHHHHHHHTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccEEEEcccHHHHHHHHHHHTTTTcEEEEcGGGGGGGGcHHHHTcTTEGGGHHHHHHHHcccEEEcccccccccTTcccGGGEEEETTccHcTTcEEEccccTTcccccHHHHHHHTTccccccccccEEEEcccHHHHHHTHHHHHHHHHHTcccccccccHHHHHHHHHccTcccEEEEcccccccGGGHHHHHHHHHHccTTEEEEEccGGGGGTTTHHTTTccEEEEccccEETTEEcEEEcccGGHHHHHHHHHHHHTTcccGGHccEEEGccEEEEEEcccHHHHHHHHcccEEEEEEcTTccHHHHHHHHHHHHHHTTcccTTTTccTcccEEEEHHHHHccc############### DISOP:02AL 1-2,643-643| PSIPRED cccHHHHHHHccccccEEEEEEHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccHHHHHHHHHHHHccccEEEEEEccccHHcccEEccEEEccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHccccEEEcccHHHHHcccccHHHcccccHHHHccccccccHHHHHHHHccccEEEEEccccHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHccccccccEEEEEcccccHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccEEEEEEccccccccccHHHHHHHHHHccccEEEcccccEEEEEEHHHHHHHHHHHHHccccccEEEEcccccEEHHHHHHHHHHHHcccccccccccccccEEEcccccHHHHHHHHHccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccHHHHHc //