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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09615.1
DDBJ      :             Holliday junction resolvase YqgF
Swiss-Prot:RUVX_RALME   RecName: Full=Putative Holliday junction resolvase;         EC=3.1.-.-;

Homologs  Archaea  0/68 : Bacteria  266/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.55.3
:149 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->146 1nmnB PDBj 1e-17 40.4 %
:RPS:SCOP  18->147 1vhxA  c.55.3.8 * 3e-31 28.6 %
:HMM:SCOP  15->148 1nu0A_ c.55.3.8 * 9.9e-31 34.6 %
:RPS:PFM   17->118 PF03652 * UPF0081 4e-11 38.8 %
:HMM:PFM   18->146 PF03652 * UPF0081 1.7e-32 33.6 125/135  
:BLT:SWISS 1->149 RUVX_RALME 9e-74 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09615.1 GT:GENE ABF09615.1 GT:PRODUCT Holliday junction resolvase YqgF GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(2977750..2978199) GB:FROM 2977750 GB:TO 2978199 GB:DIRECTION - GB:PRODUCT Holliday junction resolvase YqgF GB:PROTEIN_ID ABF09615.1 GB:DB_XREF GI:93355526 InterPro:IPR005227 InterPro:IPR006641 LENGTH 149 SQ:AASEQ MTRDMPDQLGRETPRDGTVLAFDYGEKKIGVALGNFITRQASALTILPNVTVEARFDAVGELIRQWTPVRLVVGMPVNPEAGPDDEEQPSMRLARRFGNQLNGRFNLPVEWVDERYSSRAAAMAGAKRGALDAEAARIILQQYFDELPL GT:EXON 1|1-149:0| SW:ID RUVX_RALME SW:DE RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; SW:GN OrderedLocusNames=Rmet_2742; SW:KW Complete proteome; Cytoplasm; DNA damage; DNA recombination;DNA repair; Hydrolase; Nuclease. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->149|RUVX_RALME|9e-74|100.0|149/149| GO:SWS:NREP 6 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006310|"GO:DNA recombination"|DNA recombination| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0004518|"GO:nuclease activity"|Nuclease| SEG 119->133|raaamagakrgalda| BL:PDB:NREP 1 BL:PDB:REP 17->146|1nmnB|1e-17|40.4|114/117| RP:PFM:NREP 1 RP:PFM:REP 17->118|PF03652|4e-11|38.8|98/134|UPF0081| HM:PFM:NREP 1 HM:PFM:REP 18->146|PF03652|1.7e-32|33.6|125/135|UPF0081| GO:PFM:NREP 5 GO:PFM GO:0005737|"GO:cytoplasm"|PF03652|IPR005227| GO:PFM GO:0006281|"GO:DNA repair"|PF03652|IPR005227| GO:PFM GO:0006310|"GO:DNA recombination"|PF03652|IPR005227| GO:PFM GO:0006974|"GO:response to DNA damage stimulus"|PF03652|IPR005227| GO:PFM GO:0016788|"GO:hydrolase activity, acting on ester bonds"|PF03652|IPR005227| RP:SCP:NREP 1 RP:SCP:REP 18->147|1vhxA|3e-31|28.6|126/140|c.55.3.8| HM:SCP:REP 15->148|1nu0A_|9.9e-31|34.6|130/0|c.55.3.8|1/1|Ribonuclease H-like| OP:NHOMO 267 OP:NHOMOORG 267 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111111111111111111111111111111111111111111111-1111111111111111111111--------------------------1------------------------------11111111111111111111111111111111---11-1---11111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111------1--11111111111111111111---------11111111111111111------------1---------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 131 STR:RPRED 87.9 SQ:SECSTR ################cEEEEEEccccEEEEEEEETTTTEEEEEEEEEcGGGcccHHHHHHHHHHHcccEEEEEEcccTcccTTccccTTHHHHHHHHHHHHHHHccEEEEEEccccccccccccccccccTTHHHHHHHHHHHHHc## DISOP:02AL 1-13,84-85| PSIPRED cccccccccccccccccEEEEEEEcccEEEEEEcccccccccccEEEEccccHHHHHHHHHHHHHHcccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHccc //