[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09642.1
DDBJ      :             methionyl-tRNA synthetase
Swiss-Prot:SYM_RALME    RecName: Full=Methionyl-tRNA synthetase;         EC=6.1.1.10;AltName: Full=Methionine--tRNA ligase;         Short=MetRS;

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  196/199 : Viruses  1/175   --->[See Alignment]
a.27.1b.40.4c.26.1
:690 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->556 1pfuA PDBj e-176 55.8 %
:BLT:PDB   580->664 1pybA PDBj 5e-22 62.7 %
:RPS:PDB   4->539 2d5bA PDBj 4e-64 23.7 %
:RPS:PDB   581->690 1e7zA PDBj 4e-32 33.3 %
:RPS:SCOP  3->392 1f4lA2  c.26.1.1 * 5e-50 58.2 %
:RPS:SCOP  394->554 1f4lA1  a.27.1.1 * 7e-26 37.7 %
:RPS:SCOP  581->690 1e7zA  b.40.4.4 * 5e-33 33.3 %
:HMM:SCOP  2->392 1qqtA2 c.26.1.1 * 1.9e-91 33.1 %
:HMM:SCOP  390->598 1rqgA1 a.27.1.1 * 1e-43 31.6 %
:HMM:SCOP  579->689 1gd7A_ b.40.4.4 * 1.6e-34 55.1 %
:RPS:PFM   7->401 PF09334 * tRNA-synt_1g 1e-84 48.0 %
:RPS:PFM   421->527 PF08264 * Anticodon_1 3e-09 34.6 %
:RPS:PFM   590->663 PF01588 * tRNA_bind 1e-11 44.6 %
:HMM:PFM   6->400 PF09334 * tRNA-synt_1g 2.6e-138 42.6 385/391  
:HMM:PFM   590->686 PF01588 * tRNA_bind 1e-24 43.0 93/95  
:HMM:PFM   421->503 PF08264 * Anticodon_1 7.6e-08 22.5 80/152  
:BLT:SWISS 1->690 SYM_RALME 0.0 100.0 %
:PROS 13->24|PS00178|AA_TRNA_LIGASE_I
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09642.1 GT:GENE ABF09642.1 GT:PRODUCT methionyl-tRNA synthetase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 3011163..3013235 GB:FROM 3011163 GB:TO 3013235 GB:DIRECTION + GB:PRODUCT methionyl-tRNA synthetase GB:PROTEIN_ID ABF09642.1 GB:DB_XREF GI:93355553 InterPro:IPR001412 InterPro:IPR002304 InterPro:IPR002547 InterPro:IPR004495 LENGTH 690 SQ:AASEQ MTARRILVTSALPYANGQIHIGHLVEYIQTDIWVRFQRMMGNEVYYVGADDTHGTPVMLRAEKEGITPKQLIDRVWTEHKRDFDNFLVSFDNYYSTDAEENRQLCEKIYLALKAEDLITERDVEQFYDPVKNMFLPDRFIKGECPKCGAKDQYGDSCEVCGTTYVPTDLKNPYSVVSGATPVRKSSTHFFFKLSDPRCETFLREWVADLAQPEASNKMQEWLGAEGEASTLSDWDISRDAPYFGFEIPGAPGKYFYVWLDAPIGYYASFKNLAEKRGIDFDAWVGPHSTAEQYHFIGKDILYFHTLFWPAMLRFSGYRTPTNVFAHGFLTVDGAKMSKSRGTFITAQSYTDTGMNPEWLRYYFAAKLNASMEDLDLNLDDFVARVNSDLIGKYVNIASRAAGFLVKRFDGKVNEAALANPLLEQLRQAAPQLAQYYEGREYSKALRLVMELTDAVNAFVDTNKPWELAKDESKRDALHAACSVSLEAFRLLTIYLKPVVPTMAAGVERFLNVDPLDWRAIDKQLSADRPVQPYQHLMTRVDVKQIDALLAANRDSLQAAAPAAEAGAAGASAIEPVADTITIDDFAKIDLRVAKIVACDKVEGSNKLLQLTLDLGEGKTRNVFSGIQSAYTPEQLVGKLTVVVANLAPRKMKFGMSEGMVLAASAADEKANPGLYILEPHSGAVPGMRIR GT:EXON 1|1-690:0| SW:ID SYM_RALME SW:DE RecName: Full=Methionyl-tRNA synthetase; EC=6.1.1.10;AltName: Full=Methionine--tRNA ligase; Short=MetRS; SW:GN Name=metG; OrderedLocusNames=Rmet_2769; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Metal-binding; Nucleotide-binding; Protein biosynthesis;RNA-binding; tRNA-binding; Zinc. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->690|SYM_RALME|0.0|100.0|690/690| GO:SWS:NREP 9 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| GO:SWS GO:0003723|"GO:RNA binding"|RNA-binding| GO:SWS GO:0000049|"GO:tRNA binding"|tRNA-binding| PROS 13->24|PS00178|AA_TRNA_LIGASE_I|PDOC00161| SEG 558->577|aaapaaeagaagasaiepva| BL:PDB:NREP 2 BL:PDB:REP 3->556|1pfuA|e-176|55.8|543/547| BL:PDB:REP 580->664|1pybA|5e-22|62.7|83/107| RP:PDB:NREP 2 RP:PDB:REP 4->539|2d5bA|4e-64|23.7|490/500| RP:PDB:REP 581->690|1e7zA|4e-32|33.3|105/173| RP:PFM:NREP 3 RP:PFM:REP 7->401|PF09334|1e-84|48.0|358/363|tRNA-synt_1g| RP:PFM:REP 421->527|PF08264|3e-09|34.6|107/153|Anticodon_1| RP:PFM:REP 590->663|PF01588|1e-11|44.6|74/100|tRNA_bind| HM:PFM:NREP 3 HM:PFM:REP 6->400|PF09334|2.6e-138|42.6|385/391|tRNA-synt_1g| HM:PFM:REP 590->686|PF01588|1e-24|43.0|93/95|tRNA_bind| HM:PFM:REP 421->503|PF08264|7.6e-08|22.5|80/152|Anticodon_1| GO:PFM:NREP 13 GO:PFM GO:0000166|"GO:nucleotide binding"|PF09334|IPR015413| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF09334|IPR015413| GO:PFM GO:0005524|"GO:ATP binding"|PF09334|IPR015413| GO:PFM GO:0005737|"GO:cytoplasm"|PF09334|IPR015413| GO:PFM GO:0006412|"GO:translation"|PF09334|IPR015413| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF09334|IPR015413| GO:PFM GO:0000166|"GO:nucleotide binding"|PF08264|IPR013155| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF08264|IPR013155| GO:PFM GO:0005524|"GO:ATP binding"|PF08264|IPR013155| GO:PFM GO:0005737|"GO:cytoplasm"|PF08264|IPR013155| GO:PFM GO:0006412|"GO:translation"|PF08264|IPR013155| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF08264|IPR013155| GO:PFM GO:0000049|"GO:tRNA binding"|PF01588|IPR002547| RP:SCP:NREP 3 RP:SCP:REP 3->392|1f4lA2|5e-50|58.2|347/350|c.26.1.1| RP:SCP:REP 394->554|1f4lA1|7e-26|37.7|159/160|a.27.1.1| RP:SCP:REP 581->690|1e7zA|5e-33|33.3|105/173|b.40.4.4| HM:SCP:REP 2->392|1qqtA2|1.9e-91|33.1|350/352|c.26.1.1|1/1|Nucleotidylyl transferase| HM:SCP:REP 390->598|1rqgA1|1e-43|31.6|206/210|a.27.1.1|1/1|Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases| HM:SCP:REP 579->689|1gd7A_|1.6e-34|55.1|107/109|b.40.4.4|1/1|Nucleic acid-binding proteins| OP:NHOMO 1732 OP:NHOMOORG 1173 OP:PATTERN 22221222222222222222222111111111111111111111111111111122112122123112 1111211111111111111-11111111111111111111111111111112111111114111211121111111112232122111111111111-11111111111111111111111111111111111111111111111121111111111111111111111112211222221121111111111122222221122222211111122211121121111111211111111111111111111111122111111111111111121111111111111111211211111111111111111111111111111312222111211121111222111231121111111121111111111111111111111112111111111111111111111-11111111121121112212211111111111111111111111111111111111111111111111111111111111111111111111111111111111111121111111111111111111111111111111111211111111111111111111111111111111111111111112114111111111111111111111111111111111111111111111111111111111111-1111111111111211112222222122-2222222222222222221111111211111111111111111121211121111111111111111111111111111111111111111111111111111111111111112111111111222111-111111222311111221221111111111111111111111111111111111111111-11111111111111111111111111111111 2122333-41223331222333323322222333332222222222222222221123222222322223222222222222332212-23122223332232323143276444632233241544428R4-5554332413411432242364333432435531425B43322443S4333254552432253233 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 680 STR:RPRED 98.6 SQ:SECSTR TcccEEEEEcccEETTccccHHHHHHHHHHHHHHHHHHHTTcEEEEEEEEEcccHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHTTccccEEEETTcHHHHHHHHHHHHHHHHTTcEEEEEEEEEEcccccHccHHHccccccGGGGcHHHHEEEETTTTEEccTTTccTTccTTTccccEEEEEEEEEEcGGGGHHHHHHHHHHHTcTTcEEcHHHHHHHHHHTcccccEEcEEETTTcccccEETTEEEEEEcHHHHHHTHHHHTTTTTTcHHHHHHHHHEccETGGGEEEEEEGGGHHHHHTHHHHHHHHHTcccccEEEEEcEEcTTcccccTTTTccccHHHHHHHHHcHHHHHHHHHHHHccTTccEEccHHHHHHHHHHHcccccHHHHHHHHHHHHHHcTTccccccccGGGGGGGGHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHTTTcHHHHHHHHHHTTcccGcccGGGGGccccccccccccccccETTEEEEEEEEcccccHH##########HHHTHHHHHHHHHTTccccHHHHHcccccEEEEETTcTTEEEEEcEccccccEEEEEccTTTccHHHHTTcEEEEEcccccEEETTEEEccEEcEEEcccccccccEEEccccTTccTTcccc DISOP:02AL 1-1,548-566,688-688,690-691| PSIPRED cccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHcccEEEccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccEEcccHHHHHHHHHHHHHHHHcccEEEccEEEEccHHHcccccHHHHcccccccccHHHHHHHHHHHccccccHHHcccccccccccEEEEEcccEEEEcccHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEcccccccHHHHcccHHHHccccHHHHccccccEEEEEEEccccHHHHHHHHHHHHHHccccHHHEEEEccEEEcccccccccccccccHHHHHHccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHccccccccccccccccHHHHHHccEEEEEEEEEEEccccccEEEEEEEEcccccEEEEEcHHHcccHHHHcccEEEEEEccccHHcccEEEEEEEEEEccccccccccEEEEccccccccccccc //