[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09700.1
DDBJ      :             putative TraY/DotA-like type IV secretion system protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  38/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:751 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   394->454 PF07739 * TipAS 0.00078 16.4 61/122  
:PROS 338->353|PS00036|BZIP_BASIC
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09700.1 GT:GENE ABF09700.1 GT:PRODUCT putative TraY/DotA-like type IV secretion system protein GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 3073902..3076157 GB:FROM 3073902 GB:TO 3076157 GB:DIRECTION + GB:PRODUCT putative TraY/DotA-like type IV secretion system protein GB:PROTEIN_ID ABF09700.1 GB:DB_XREF GI:93355611 InterPro:IPR004827 LENGTH 751 SQ:AASEQ MIRRILTIALALGLTAGVAYADSPTGMSLNQFTPPAGDTSVDFLREVFGNIIGLISSGGNVSGGQNDDVLGAMMKVFNAAVLFLGMLFIAYTTIKGTIDSAHDGEVLGKSMKSPYVILRSVAGTALLLPLGSGYSLIQIGILWLALQGVGVADAIWKAAIEQINRDNMISRPMIPDSRPLAANILKFEVCAAAMNKQFQDSGRGTRVHPVPSTQVMMNSGELLNYDVFDAIPVVGAYTTIKNLSNAKYTVSNYQWKANDNSYVNPTVCGGISWKQSWEASEGNSNTKVIKEPIMTAHAQAVQRMIQELQPTANQIVAGQKPTPGAIDTAANNYENTLRDAAKNAVSQTNDRARSDFLQAAKDGGWIFAGTWYNHIVKMNDVMQSTLNGLPTSEPIDITDKETQEVLQTYQDAMATANEYTKHRVEGIRQVYYNQTDVRAPQQGEGAWEYVRKLMSTPFMGAINQMTQEIAGSNLNHMSQMKSFGDSIAGTGEALLVGMAGATGVANSWFAQGTAKTGFDAAAVLQFLSGMVTTIVIALFFFGAVLSSYVPMIPFITWMTSVVNWFVLALESVIAGPLFAVAHIHPDGDDAVGKAGNGYMMILSLVMRPALMLFGLIGGMLLTQPVVGLINVAFMTVVAGIQADSMTGIVSFFAYVTIYVIIMTTVVHIVFSLIHWIPDNILRWLGAHAGGIGSAERAGEQGHDILVGGVREVKHGAGGLGGGSQKRPSGGSGAGGELRPSASPSNKDLLGD GT:EXON 1|1-751:0| PROS 338->353|PS00036|BZIP_BASIC|PDOC00036| TM:NTM 9 TM:REGION 5->21| TM:REGION 71->93| TM:REGION 111->133| TM:REGION 139->161| TM:REGION 493->515| TM:REGION 526->548| TM:REGION 563->585| TM:REGION 607->629| TM:REGION 650->672| SEG 2->17|irriltialalgltag| SEG 49->64|gniiglissggnvsgg| SEG 610->621|lmlfgliggmll| SEG 655->669|vtiyviimttvvhiv| HM:PFM:NREP 1 HM:PFM:REP 394->454|PF07739|0.00078|16.4|61/122|TipAS| OP:NHOMO 43 OP:NHOMOORG 38 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------11--1----------------------------------11111111---1------------------------------------------------------------------31---1---1---------------1--1-------------------------------------------------------------------------------------------------1----------------------------------------1-------------------------------1------1-------------------1----1-111111111----------------------------------1-----------3----------------------------1-2-------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,204-222,342-359,719-748,750-752| PSIPRED cHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHcccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEccccccccEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEcHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHccccccccccccccccHHHHHHHHHccccHHHHHHHccccccccccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHcccHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccc //