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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09748.1
DDBJ      :             fatty acid desaturase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  226/915 : Eukaryota  67/199 : Viruses  0/175   --->[See Alignment]
:412 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   189->262 3dd7C PDBj 9e-10 8.5 %
:HMM:PFM   38->239 PF00487 * FA_desaturase 1.7e-20 16.4 201/257  
:HMM:PFM   375->388 PF11918 * DUF3436 0.00082 64.3 14/55  
:BLT:SWISS 52->275 ADS32_ARATH 2e-25 30.9 %
:BLT:SWISS 283->411 TNPA_BORPA 3e-04 25.0 %
:PROS 142->194|PS00223|ANNEXIN
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09748.1 GT:GENE ABF09748.1 GT:PRODUCT fatty acid desaturase GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(3125116..3126354) GB:FROM 3125116 GB:TO 3126354 GB:DIRECTION - GB:PRODUCT fatty acid desaturase GB:PROTEIN_ID ABF09748.1 GB:DB_XREF GI:93355659 InterPro:IPR001464 InterPro:IPR001522 InterPro:IPR005804 LENGTH 412 SQ:AASEQ MVVPHCIPRFLDGEHSLFDSILDWAANGLANWSWWEIVIYTLVMTHITIAGVTIFLHRCMAHRSLDLHPIAQHFFRFWLWMTTGMVTKEWTAIHRKHHAKCETEDDPHSPQTRGIRKVLLEGAELYRAEAKNKETITKFGHGTPDDWIERNLYSRFSWQGVALMLIIDLALFGLVGMSVWAVQMLWIPIHAAGIINGLGHYWGYRNYDCEDASTNVSPWGFIIGGEELHNNHHTYPTSAKFSIKWYEIDVGWWYIRAMQSVGLAKVKKIPPKARLVEARPVDHNTLEAIIANRYDVMARYAKTLKSAYKDELRKHKEGNTPEYSSFKPARKWFHREETKLAAPQRQQLATIVEQNKMLSTFVEMRRELAVIWGRSNLTREQLLAQLQAWCHRAEASGIQALQEFSLRLRRYA GT:EXON 1|1-412:0| BL:SWS:NREP 2 BL:SWS:REP 52->275|ADS32_ARATH|2e-25|30.9|217/361| BL:SWS:REP 283->411|TNPA_BORPA|3e-04|25.0|124/406| PROS 142->194|PS00223|ANNEXIN|PDOC00195| TM:NTM 2 TM:REGION 37->59| TM:REGION 168->190| RP:PDB:NREP 1 RP:PDB:REP 189->262|3dd7C|9e-10|8.5|71/122| HM:PFM:NREP 2 HM:PFM:REP 38->239|PF00487|1.7e-20|16.4|201/257|FA_desaturase| HM:PFM:REP 375->388|PF11918|0.00082|64.3|14/55|DUF3436| OP:NHOMO 404 OP:NHOMOORG 293 OP:PATTERN -------------------------------------------------------------------- 113--------------------------------------333-------------1------1211111----------------------------1-----231-1--------------1-----------111-------3435111111112122221362221121111121111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-4-----------21-------------------------------------1---11--------2----------------------1-------------11-1111111111----------11111222131111111111111111122111111111111111131111111--21--------11111-------------------------111123------------------------------1-12--1--1-1111---111111--1-2---2-----------------------------------------------------------------------------------------------2-----3222113-----------------11--1--1111-11112111111111111211112211--1-1------11--2222222222--------111111------------------------------------------------- --------211-----111---12-21------12-----------1-----2--11111111--1111111---11111111111-----11-11-----1-----3--2--1----------------------------------1------1--------------2---1-2118111112-12-91--2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 71 STR:RPRED 17.2 SQ:SECSTR ############################################################################################################################################################################################HHHHHHHHHHHTT###ccccccHHHHHHHHHHHHHHHTTccccccTTHHHHHHHHHHTcccHHHHHHHHHHHHc###################################################################################################################################################### DISOP:02AL 278-280,282-283,412-413| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHccccccccccccccccccccccHHHHHHHHHHcccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccHHHHHccccccccccHHHHHHHHHHcccHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccc //