[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09802.1
DDBJ      :             protein of unknown function DUF224, cysteine-rich region
Swiss-Prot:             

Homologs  Archaea  38/68 : Bacteria  432/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.1.2d.349.1d.58.1
:423 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->95 1zoyB PDBj 1e-07 29.9 %
:RPS:PDB   1->137 1d0cB PDBj 2e-10 14.4 %
:RPS:PDB   182->337 1cg1A PDBj 2e-04 16.3 %
:RPS:SCOP  2->103 1nekB1  a.1.2.1 * 7e-13 24.5 %
:RPS:SCOP  320->389 2jovA1  d.349.1.1 * 2e-13 12.9 %
:HMM:SCOP  17->157 2fug91 d.58.1.5 * 1.7e-23 28.4 %
:RPS:PFM   337->395 PF02754 * CCG 1e-06 37.3 %
:HMM:PFM   199->261 PF02754 * CCG 8.3e-11 30.0 60/64  
:HMM:PFM   335->395 PF02754 * CCG 1.6e-11 29.5 61/64  
:HMM:PFM   23->37 PF00037 * Fer4 8e-06 46.7 15/24  
:HMM:PFM   72->88 PF00037 * Fer4 5e-05 35.3 17/24  
:BLT:SWISS 1->414 GLCF_ECOLI e-133 57.4 %
:PROS 25->36|PS00198|4FE4S_FER_1
:PROS 75->86|PS00198|4FE4S_FER_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09802.1 GT:GENE ABF09802.1 GT:PRODUCT protein of unknown function DUF224, cysteine-rich region GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 3185602..3186873 GB:FROM 3185602 GB:TO 3186873 GB:DIRECTION + GB:PRODUCT protein of unknown function DUF224, cysteine-rich region GB:PROTEIN_ID ABF09802.1 GB:DB_XREF GI:93355713 InterPro:IPR001450 InterPro:IPR004017 LENGTH 423 SQ:AASEQ MQTTLADFLRNTPEGEEAKSIVGKCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGNPVTESTRLHLDRCLTCRNCESTCPSGVTYGHLVDIGRKIVDDRLEAQGIKRPAKERIVRWVLREGLTRPALFGPALRLGQIVRPWLPQMLRNKVPASEPVAGTWPRTEHPRKMLLLDGCVQPAMSPNINAATARVFDKLGVQLVVAREAGCCGAIRFHNGDHPGGLDNMRANIDAWWPHIEAGAEAIVMTASGCGAMVKDYGHLLRNDPTYASRAARVSAMTRDLSELLPDFTDELHRLAGAVPRDSRRVAWHPPCTLQHGQQIRGKVEALLTRLGVDVRLCADSHLCCGSAGTYSVLQPELSYKLRDDKLAKLQATSPESIVTANIGCITHLQSGTETPVMHWVELVDRMLAPVVAAQAA GT:EXON 1|1-423:0| BL:SWS:NREP 1 BL:SWS:REP 1->414|GLCF_ECOLI|e-133|57.4|404/407| PROS 25->36|PS00198|4FE4S_FER_1|PDOC00176| PROS 75->86|PS00198|4FE4S_FER_1|PDOC00176| BL:PDB:NREP 1 BL:PDB:REP 8->95|1zoyB|1e-07|29.9|87/239| RP:PDB:NREP 2 RP:PDB:REP 1->137|1d0cB|2e-10|14.4|125/414| RP:PDB:REP 182->337|1cg1A|2e-04|16.3|147/431| RP:PFM:NREP 1 RP:PFM:REP 337->395|PF02754|1e-06|37.3|59/63|CCG| HM:PFM:NREP 4 HM:PFM:REP 199->261|PF02754|8.3e-11|30.0|60/64|CCG| HM:PFM:REP 335->395|PF02754|1.6e-11|29.5|61/64|CCG| HM:PFM:REP 23->37|PF00037|8e-06|46.7|15/24|Fer4| HM:PFM:REP 72->88|PF00037|5e-05|35.3|17/24|Fer4| RP:SCP:NREP 2 RP:SCP:REP 2->103|1nekB1|7e-13|24.5|102/132|a.1.2.1| RP:SCP:REP 320->389|2jovA1|2e-13|12.9|70/77|d.349.1.1| HM:SCP:REP 17->157|2fug91|1.7e-23|28.4|134/0|d.58.1.5|1/1|4Fe-4S ferredoxins| OP:NHOMO 747 OP:NHOMOORG 472 OP:PATTERN -----11111111111-12121211--1-1--11-111-----1111--11111-------111---- 12214111----1--------1---1------1111-123----1-11-----2-11-----11123111-----------1211111-----------------2---1--------------------------33334---221111111111111111111111111-1-----1----22211---222333332232323223432222223233-2-1------211-------------------1---11-------1111-1----111------------------------------------------------------------------------2--3-451431--33-----1-111---1-----22121111111111111111-111-2211212321--11111121111112---1221111211--------211-2121-----------------------------1--1--11111422424233322235333323443343311222221111112111121-1-111111111222322-3614232243443-3131133-32222---31--1-11112-1211111-111-11112---2----1111111-1-1111-1--1-----3213------1-212--2111212122-122222222212222122----21--2---1----------1---1-1111---------------------------2-21-1111111----1111-------11-2-1111122-111122-11-----------11211111---22--------------111-----------------------------------------------------21- -------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 284 STR:RPRED 67.1 SQ:SECSTR TTcHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHTcTTTcTTcTTGGGTTcEEEEccccccHHHHHHHHHHHHHHHHHHGGGcccHHHHcccEEEEcccccTTccccEEcccccccccEEEcccccEEEcGG############################################ccHHHHHHHHHHHHHHHHHTEEcHHHHHHHHHHTTccEEEEEEEEGGGcTTT###ccTTccccccccTHHHHHTTcccGG######GccEEEEEEcccEEEccccTTccccHHHHHHHHHTcTTTccccEEEcEEHHHHHHHHHHHTccEEEEccG###################################################################################### DISOP:02AL 1-2,422-424| PSIPRED cccccccHHHccccHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHccccccHHHHccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHccccccccccccEEEEcccHHHHHcHHHHHHHHHHHHHcccEEEEccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEccHHHHHHcccHHHHHHHHHHccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHccccccccHHHHHHHHHccccHHccc //