[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09815.1
DDBJ      :             ATP-dependent DNA helicase RecG
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  880/915 : Eukaryota  20/199 : Viruses  0/175   --->[See Alignment]
b.40.4c.37.1
:737 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   62->704 1gm5A PDBj 5e-98 42.0 %
:RPS:PDB   250->674 3bxzB PDBj 6e-42 12.8 %
:RPS:SCOP  63->204 1gm5A2  b.40.4.9 * 5e-13 20.3 %
:RPS:SCOP  207->498 1gm5A3  c.37.1.19 * 3e-71 41.3 %
:RPS:SCOP  497->687 2eyqA5  c.37.1.19 * 6e-53 40.4 %
:HMM:SCOP  49->208 1gm5A2 b.40.4.9 * 1.3e-23 32.0 %
:HMM:SCOP  211->498 1gm5A3 c.37.1.19 * 3.4e-58 32.6 %
:HMM:SCOP  497->712 2eyqA5 c.37.1.19 * 2.5e-47 36.1 %
:RPS:PFM   326->434 PF00270 * DEAD 8e-05 33.3 %
:RPS:PFM   562->631 PF00271 * Helicase_C 2e-06 37.7 %
:HMM:PFM   305->478 PF00270 * DEAD 1.6e-20 23.5 149/167  
:HMM:PFM   561->632 PF00271 * Helicase_C 2.4e-16 33.8 71/78  
:BLT:SWISS 62->732 RECG_PASMU e-161 49.1 %
:PROS 404->414|PS00435|PEROXIDASE_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09815.1 GT:GENE ABF09815.1 GT:PRODUCT ATP-dependent DNA helicase RecG GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION complement(3196768..3198981) GB:FROM 3196768 GB:TO 3198981 GB:DIRECTION - GB:PRODUCT ATP-dependent DNA helicase RecG GB:PROTEIN_ID ABF09815.1 GB:DB_XREF GI:93355726 InterPro:IPR001410 InterPro:IPR001650 InterPro:IPR002016 InterPro:IPR004365 InterPro:IPR004609 InterPro:IPR011545 LENGTH 737 SQ:AASEQ MGARLRLLAHVAAHIPALMPGSATEPIDEPASAARKSAKAADAKPSTAAARLAKLGLRRSVDLVLHLPLRYEDETTLEPIRDAIHRAGIGLPAQIEGEVISNEVTFRPRRQLVVKVADETGELTLRFLNFYGGQTKQMAEGTRLRVRGEIRGGFFGAEMVHPTVRAVTPGEPLPDRLTPVYPATAGISQAYLRKAIGGAMQRTPMPETLPQAVLRGPLAQLKLPPLIDCLRLLHNPPQQESEAALADRSHPAWVRIKFDELLAQQISLRRSQAARKEKNAPSMPRRAGGLLTSFLGALPFRLTGAQQRVVEEIAADMARPHPMHRLLQGDVGSGKTIVAALAACQAIDAGYQAALMAPTEILAEQHFRKLSAWLEPLGVPVVWLAGSLKAKEKREAVARAESGEAKLVIGTHALIQDTVRFARLGLAVVDEQHRFGVAQRLALRGKAGEADQPGEPARPAEEKVVPHQLMMSATPIPRTLAMTYYADLDVSVIDELPPGRTPIVTRLVNDARRDEVIERVHHAAAEGRQVYWVCPLIEESEALQLQTAVETYETLVAALPDLRVGLVHGRLPPAEKAAVMDDFTANRLQVLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQLRGRVGRGSAESVCLLMYQAPLSPTARERLATMRETTDGFEIARRDLQIRGPGEFLGARQSGEAMLRFADLETDAWLVDYAQEAAELMLERYPEAVEAHLSRWLGGREHFLKA GT:EXON 1|1-737:0| BL:SWS:NREP 1 BL:SWS:REP 62->732|RECG_PASMU|e-161|49.1|648/693| PROS 404->414|PS00435|PEROXIDASE_1|PDOC00394| SEG 3->14|arlrllahvaah| SEG 31->59|asaarksakaadakpstaaarlaklglrr| SEG 389->401|kakekreavarae| BL:PDB:NREP 1 BL:PDB:REP 62->704|1gm5A|5e-98|42.0|588/729| RP:PDB:NREP 1 RP:PDB:REP 250->674|3bxzB|6e-42|12.8|400/440| RP:PFM:NREP 2 RP:PFM:REP 326->434|PF00270|8e-05|33.3|105/167|DEAD| RP:PFM:REP 562->631|PF00271|2e-06|37.7|69/76|Helicase_C| HM:PFM:NREP 2 HM:PFM:REP 305->478|PF00270|1.6e-20|23.5|149/167|DEAD| HM:PFM:REP 561->632|PF00271|2.4e-16|33.8|71/78|Helicase_C| GO:PFM:NREP 6 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00270|IPR011545| GO:PFM GO:0005524|"GO:ATP binding"|PF00270|IPR011545| GO:PFM GO:0008026|"GO:ATP-dependent helicase activity"|PF00270|IPR011545| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF00271|IPR001650| GO:PFM GO:0004386|"GO:helicase activity"|PF00271|IPR001650| GO:PFM GO:0005524|"GO:ATP binding"|PF00271|IPR001650| RP:SCP:NREP 3 RP:SCP:REP 63->204|1gm5A2|5e-13|20.3|138/180|b.40.4.9| RP:SCP:REP 207->498|1gm5A3|3e-71|41.3|259/259|c.37.1.19| RP:SCP:REP 497->687|2eyqA5|6e-53|40.4|183/211|c.37.1.19| HM:SCP:REP 49->208|1gm5A2|1.3e-23|32.0|153/0|b.40.4.9|1/1|Nucleic acid-binding proteins| HM:SCP:REP 211->498|1gm5A3|3.4e-58|32.6|264/264|c.37.1.19|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 497->712|2eyqA5|2.5e-47|36.1|205/0|c.37.1.19|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1769 OP:NHOMOORG 900 OP:PATTERN -------------------------------------------------------------------- 2222222222222221222-22222222222222222222222222222222222222222222222222221222222221211222222232222--2222222222211111111111111122222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222232222222222222222223222222222222222222222122222131222222222222222222222223332222222222222222222-33333333222222222222322222222222223322222222222222222222222222211--2212222222222111112222222222222222222222222222222232222222222232222222232222222222222222222322211111111111111222222222222221111222322222222222222222222222222222222222222222322222222221-22222-1111122222222222222222-22222222222222222222222222222222222222222222222222221222222222222--22222222222222223222222222222222222322222222222222222222222222222222222222222222223222222222222222221222222222222222222---1---------------------2222222222212 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1-1-12A2221-1223-22111---1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 675 STR:RPRED 91.6 SQ:SECSTR #############################################################GGTcccccEEEcccccccccccGGGccccEEEEEEEEEEEEEEEEEEEcTEEEEEEETTEEEEEEEccEGGGGGccccTTcEEEEEEEEEEcTTTcEEEEcccGGGcEEEEEccEEEEEETTTTEEEEEETTTccHHHEEEcccTEEEcTTccEEEEEEEccccccEEEEEETTTccccEEEEGGGccHHHHTTccHHHHHTHHHHHHHHHHTTccGGGcHHHHHcccHHHHHHHHHHTcccccHHHHHHHHHTTTcTTccTTEEEEccTTccHHHHTHHHHHHHTTccccEEEEEccHHHHHHHHHTTHHHHHHTTccEEEccTTccHHHHHHHHHccEEHHHHHHHHHTcccGGGcccccccEEEEETHHHHHTTcccccEEEETTHEccEEccTTTGGGcccEEEEEEccccTTccHHHHHcccEEEEcccccccccEEcccEEEHHHHHHHHHHHHHHHHHTccEEEEcccHHHHHHHHHHHHHGGGGccEEEETcccccEEccccHHHHHHHHTTTTccccEEEEcTTccTTccccTTccTHHHHTTcccccTTTTHHHHTTHHHHHHHHHHTTcccccccTTHHTccGGGcccEEEEEEEHHHHccccHHHHHHHHHHHHHHHHccHHHHHHHHHTTHHHHHHHHHTTcHHHHHHHHHHHHHHHcGGGc# DISOP:02AL 1-2,28-47,274-282,391-399,736-738| PSIPRED cccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHccccccccEEEEEEEEEEEEcccccccEEEEEEEEccEEEEEEEEcccHHHHHccccccEEEEEEEEEEcccEEEEEccEEEEEcccccccccEEEEEEccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccHHHHHHHHHcccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHcccccEEEccHHHHHHHHccccccEEEEccHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccEEEEEccccHHHHHHHHHccccEEEEcccccccccEEEEEEccccHHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHcccccEEEEHHHHHcccccccccEEEEEccccccHHHHHHHHHccccccccEEEEEEEcccccHHHHHHHHHHHHHccccEEHHHHHccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcccHHHHHcc //