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Ralstonia metallidurans CH34 (rmet0)
Gene : ABF09877.1
DDBJ      :             two component transcriptional regulator, winged helix family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  830/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:221 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->215 2oqrA PDBj 3e-18 28.4 %
:RPS:PDB   1->120 1c4wA PDBj 4e-14 17.5 %
:RPS:PDB   123->216 2d1vA PDBj 5e-19 24.7 %
:RPS:SCOP  1->120 1a0oA  c.23.1.1 * 1e-15 22.5 %
:RPS:SCOP  123->216 1gxpA  a.4.6.1 * 7e-19 28.0 %
:HMM:SCOP  1->140 1w25A2 c.23.1.1 * 1.3e-34 41.3 %
:HMM:SCOP  118->220 1ys7A1 a.4.6.1 * 7.9e-20 37.3 %
:RPS:PFM   3->113 PF00072 * Response_reg 5e-07 24.3 %
:RPS:PFM   146->215 PF00486 * Trans_reg_C 4e-11 45.7 %
:HMM:PFM   3->112 PF00072 * Response_reg 4.5e-29 38.2 110/112  
:HMM:PFM   148->216 PF00486 * Trans_reg_C 8.1e-19 42.0 69/77  
:HMM:PFM   91->156 PF11578 * DUF3237 0.00048 30.8 65/151  
:BLT:SWISS 1->219 QSEB_ECOLI 3e-34 34.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABF09877.1 GT:GENE ABF09877.1 GT:PRODUCT two component transcriptional regulator, winged helix family GT:DATABASE GIB00349CH01 GT:ORG rmet0 GB:ACCESSION GIB00349CH01 GB:LOCATION 3260594..3261259 GB:FROM 3260594 GB:TO 3261259 GB:DIRECTION + GB:PRODUCT two component transcriptional regulator, winged helix family GB:PROTEIN_ID ABF09877.1 GB:DB_XREF GI:93355788 InterPro:IPR001789 InterPro:IPR001867 LENGTH 221 SQ:AASEQ MRVLLVEDDPMIGDAIQGALKDASYAADWVKDGQTALTTLGCQHYDLVLLDLGLPGKDGLEVLASIRAKDNPVPLLIITARDGLDDRLRGLDGGADDYVSKPFQMAELLARMRAVLRRKGGTAAPVLSNGVVTLDPATKEACANDGPQVQLSNREFSLLQALLVRPGAILSRSELEDRIYGWGEEVESNAVEYLIHALRRKLGGEVIKNVRGVGWMVSKGA GT:EXON 1|1-221:0| BL:SWS:NREP 1 BL:SWS:REP 1->219|QSEB_ECOLI|3e-34|34.9|218/219| SEG 46->60|dlvlldlglpgkdgl| SEG 80->97|ardglddrlrgldggadd| BL:PDB:NREP 1 BL:PDB:REP 3->215|2oqrA|3e-18|28.4|211/226| RP:PDB:NREP 2 RP:PDB:REP 1->120|1c4wA|4e-14|17.5|120/127| RP:PDB:REP 123->216|2d1vA|5e-19|24.7|93/103| RP:PFM:NREP 2 RP:PFM:REP 3->113|PF00072|5e-07|24.3|111/111|Response_reg| RP:PFM:REP 146->215|PF00486|4e-11|45.7|70/77|Trans_reg_C| HM:PFM:NREP 3 HM:PFM:REP 3->112|PF00072|4.5e-29|38.2|110/112|Response_reg| HM:PFM:REP 148->216|PF00486|8.1e-19|42.0|69/77|Trans_reg_C| HM:PFM:REP 91->156|PF11578|0.00048|30.8|65/151|DUF3237| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 1->120|1a0oA|1e-15|22.5|120/128|c.23.1.1| RP:SCP:REP 123->216|1gxpA|7e-19|28.0|93/103|a.4.6.1| HM:SCP:REP 1->140|1w25A2|1.3e-34|41.3|138/0|c.23.1.1|1/1|CheY-like| HM:SCP:REP 118->220|1ys7A1|7.9e-20|37.3|102/0|a.4.6.1|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 5768 OP:NHOMOORG 833 OP:PATTERN -------------------------------------------------------------------- 4495E45466744597788-8C4468888886D7886CEB465C5555433466725511DBC5C6BFDI6222232256A95133564463-211----17111C1856--------------1222222122-18AAAB736A3JAG7A9655673356566928FFH34434334334338843323-A42GGGGGFIFBIEJJIE682263FIP368D487333333MM3656666666666664445456645554445554466344354454898654443355555555555455555555555543432344442GC9E999CA9B8A57ECC3555E793388G52NLA66234414353126754988654554A7ECEB799GAAE66666666557-7A98BCCA5F41DHHFA9CFEB899F685778B5AB776888888885796684611111111111111111111111111111-599428BA8DGILKLE9BBB8IIJICADC6DJJJDHFO-1EIFA7DC9KC9BF4BB9543754121111165269957412211243222-967757746332244-43533311111211-------5845622B935B68276558BBA5C9BBBA9A89C99--22315------AA899969AAA9A9BA9-ABAA9A9A9CA99999998CBC8B5669799999989989899C98799AA51788888888888---511111333358A8F212111122221--28756846447A6GGHGGILL8IMKMCEEF2212122123456B777775879AFE86A668885434--51333333----------1-------------------------2532234333163 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------6-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 221 STR:RPRED 100.0 SQ:SECSTR EEEEEEcccHHHHHHHHHHHHTcTTEEEEEccHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGTHHccccEEETTEEEETTTTEEEETTEETccccHHHHHHHHHHHHTTTccccHHHHHHHHHcTTccccTHHHHHHHHHHHHHHccccEEEETTTEEEETccT DISOP:02AL 121-125,220-222| PSIPRED cEEEEEcccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHccccccEEEEEccccHHHHHHcccccccccEEccccHHHHHHHHHHHHccccccccccEEEccEEEccccEEEEEcccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccHHHHHHHHHHHHccccEEEEcccEEEEcccc //