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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37309.1
DDBJ      :             protein translocase subunit yidC
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  842/915 : Eukaryota  33/199 : Viruses  0/175   --->[See Alignment]
a.59.1
:621 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   92->383 3blcA PDBj 3e-61 20.6 %
:RPS:PDB   422->493 1e91A PDBj 1e-17 13.9 %
:RPS:SCOP  422->493 1e91A  a.59.1.1 * 2e-18 13.9 %
:RPS:PFM   395->598 PF02096 * 60KD_IMP 2e-38 44.1 %
:HMM:PFM   393->598 PF02096 * 60KD_IMP 3.3e-65 42.6 183/196  
:BLT:SWISS 1->620 OXAA_NITHX 0.0 73.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37309.1 GT:GENE ABE37309.1 GT:PRODUCT protein translocase subunit yidC GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 84531..86396 GB:FROM 84531 GB:TO 86396 GB:DIRECTION + GB:PRODUCT protein translocase subunit yidC GB:PROTEIN_ID ABE37309.1 GB:DB_XREF GI:91681007 InterPro:IPR001708 LENGTH 621 SQ:AASEQ MTDNRNTILAVILSGLVLLGWQYFFNIPQMEKQRAAQQAQQQQEAAKQQTPPAATTPGAPNAPAAPGAPGAPANQPAANAPVVSRDAAIAASPRIKVETPRLDGTLSLKGARIDDLSLSQYHETVDPKSAPIHLFSPSGSANPYYAEFGWVGAAGSNVKLPDQNTLWEQEGSGALTPANPVTLKWDNGEGLTFRRQIAVDDRYLFTIKDDVTNVGGGPVTLYPFALISRHGTPHVEGFYILHEGLIGYLGEQGLQEYGYAKIDEAKTVGFKATNAWMGITDKYWASALLPDTNAQLQARFSSNQVGATRTYQTDYLEDAKTVPIGGTATATARLFAGAKEARVVGINFPFAGLGGYNQQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLIFLPLANKSYASMAKMKAIQPQLLALKERHPDDKAKQQQEMMEIYRKEKINPVAGCLPVLLQIPVFFSLYKVLFVTIEMRHAPFFGWIHDLSAADPTNLFNLFGLIPYDPSTLPVIGSYLVLGVWPLVMGFTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWNNTLSVIQQAYIMRRNGVKVELWDNLKSAVVKPKKTA GT:EXON 1|1-621:0| BL:SWS:NREP 1 BL:SWS:REP 1->620|OXAA_NITHX|0.0|73.3|603/609| TM:NTM 5 TM:REGION 4->26| TM:REGION 386->408| TM:REGION 461->483| TM:REGION 521->542| TM:REGION 565->587| SEG 35->81|aaqqaqqqqeaakqqtppaattpgapnapaapgapgapanqpaanap| SEG 352->363|glggynqqlgln| RP:PDB:NREP 2 RP:PDB:REP 92->383|3blcA|3e-61|20.6|267/276| RP:PDB:REP 422->493|1e91A|1e-17|13.9|72/85| RP:PFM:NREP 1 RP:PFM:REP 395->598|PF02096|2e-38|44.1|179/191|60KD_IMP| HM:PFM:NREP 1 HM:PFM:REP 393->598|PF02096|3.3e-65|42.6|183/196|60KD_IMP| GO:PFM:NREP 2 GO:PFM GO:0016021|"GO:integral to membrane"|PF02096|IPR001708| GO:PFM GO:0051205|"GO:protein insertion into membrane"|PF02096|IPR001708| RP:SCP:NREP 1 RP:SCP:REP 422->493|1e91A|2e-18|13.9|72/85|a.59.1.1| OP:NHOMO 985 OP:NHOMOORG 875 OP:PATTERN -------------------------------------------------------------------- 1111111111111-11112-111111111111111112111111--111----1-111111111112222111112111111211111111111111--1111111111111111111111111111111111111111111-111111111111--11111111111111111111111111111111111212222222222222222222212222223111111111111---------------111-122111121212222112221-1222111-111-111111111111111111111111111---------12111111111111111221111111111--1111111-11111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111121111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111111111111-1111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111-11111112111111111111111111111111111111111111111111111111111111111111111111111111111111111111--11---------------------1111111111111 ------------11----------------------------------------------------------------------------------------1-----41-111-1-----------------------------------------11---------------12222S333222114-3122-11-3 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 352 STR:RPRED 56.7 SQ:SECSTR #########################################################################################ccccEEEEEccccEEEEETcTccEEEEEEEEEEccTTcccEEEEEEEEcEcccEEEEEEEEEcTTcTTcGGGcccccccccccEEccTTcEEEEEEEcTTccEEEEEEEEETccEEEEEEEEEccccccEEEEEEEEEEEEcccccEEcccccEEEEEEcccccccEEcHHHHHTTcccEEEEcccEEEE#EccEEEEEEEEccccEEEEEEEEETTTTEEEEEEEEcccEEEcTTcEEEEEEEEEEEEccHHHHHH#############HHcTTcccHHHHHHHHHHTccccc######################################HHHHHHHHHHHHHHHHTcccHHHHHHHHHHHHHHTTccccccccccccHHHHHHHHHHHTcccHHHHHHHHc################################################################################################################################ DISOP:02AL 1-3,30-89,437-447,543-557,609-622| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHccccEEEEEccEEEEEEEccccEEEEEEEcccccccccccccEEEEcccccccEEEEEEcccccccccccccccccEEEEcccEEcccccEEEEEEEccccEEEEEEEEEcccEEEEEEEEEEEcccccEEEEEEEEEEEccccccccEEEEEEEEEEEEccccEEEccHHHHHccccccccccccEEEEEEccEEEEEEcccccccEEEEEEcccccccEEEEEEEcccEEEccccEEEEEEEEEEccHHHHHHHHHcccccccccHHHcccccccHHHHHcHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEcccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHccccccccccccc //