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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37318.1
DDBJ      :             transposase, IS4 family
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  111/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.3.1
:320 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  181->318 2ebfX3  d.3.1.17 * 2e-13 11.2 %
:RPS:PFM   46->118 PF05598 * DUF772 7e-15 49.3 %
:RPS:PFM   182->311 PF01609 * Transposase_11 3e-09 36.2 %
:HMM:PFM   46->120 PF05598 * DUF772 1.1e-29 54.7 75/77  
:HMM:PFM   133->313 PF01609 * Transposase_11 2.5e-24 29.7 158/207  
:HMM:PFM   105->137 PF09106 * SelB-wing_2 0.00048 33.3 33/59  
:BLT:SWISS 21->313 INSH5_ECOLI 1e-33 32.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37318.1 GT:GENE ABE37318.1 GT:PRODUCT transposase, IS4 family GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(93536..94498) GB:FROM 93536 GB:TO 94498 GB:DIRECTION - GB:PRODUCT transposase, IS4 family GB:PROTEIN_ID ABE37318.1 GB:DB_XREF GI:91681016 InterPro:IPR002559 LENGTH 320 SQ:AASEQ MAQDSFIEALLPAGFGRNERLERISGLIDWDRLAVLIRKVRPGETGRPPYAPLAMFKALLLQQWYGLSDPGLEEALLDRVSFRRFCGFALDAQTPDETTLCRFRNALQQAGLGDALFQEVLRQLEAAGYVLKTGTLIDATLVQSSGRTPPSGSTPREVESRSSHDPQADWTRHGAGRRLFFGYKAHIAIDQGSGLIRARKLTGAKTYESEVADDLVLGDEKAVYADKAYEKRARRQALKARGIKDRIQHRRNKHQKALPRWQAVRNKLIGRVRQAIERTFAQLKGRYGFTRMRYAGITANAFHLDLISIAYNLRTAAAIR GT:EXON 1|1-320:0| BL:SWS:NREP 1 BL:SWS:REP 21->313|INSH5_ECOLI|1e-33|32.7|278/326| SEG 144->156|ssgrtppsgstpr| RP:PFM:NREP 2 RP:PFM:REP 46->118|PF05598|7e-15|49.3|73/76|DUF772| RP:PFM:REP 182->311|PF01609|3e-09|36.2|130/192|Transposase_11| HM:PFM:NREP 3 HM:PFM:REP 46->120|PF05598|1.1e-29|54.7|75/77|DUF772| HM:PFM:REP 133->313|PF01609|2.5e-24|29.7|158/207|Transposase_11| HM:PFM:REP 105->137|PF09106|0.00048|33.3|33/59|SelB-wing_2| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF01609|IPR002559| GO:PFM GO:0004803|"GO:transposase activity"|PF01609|IPR002559| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF01609|IPR002559| RP:SCP:NREP 1 RP:SCP:REP 181->318|2ebfX3|2e-13|11.2|134/192|d.3.1.17| OP:NHOMO 778 OP:NHOMOORG 115 OP:PATTERN -------------------------------------------------J1----------------- ----------------------------------------------------1-------------------111-------------------Cl--------------------------------1-5--1---------------1-----------------------------------------4-------------------------------------------------1------------------------------------------------------------------------11--2------------------------------------------B----------------------------8--2-6-1----------1--------------11---1--------------------AAAAAAAA122H------------------------------------11-----1-----12----CC11-----1-J1--1-----42F3C1-12211--1--------7ABI----A-----3--------------------------1-------------------------1-----25--------------1---1------------A-------------B---I--1----2C12-1-----4-1C---6---------------A------------------------------------------1-----------------------------8----------21115f812-------------23223----1---7779yzl--------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------1----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,144-177| PSIPRED ccccHHHHHHHHHHcccccHHHHHHHHccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHcHHHHHHHcccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccEEEEEEEEccccccccccccccccccccccccHHHHHHcccccccEEEEEEEEccccccccEEEEEEccccccHHHHHHHHHcccccEEEEccccccHHHHHHHHHccccEEEcccccccccccccHHHHHHHHHHccccccccHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHcc //