[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37322.1
DDBJ      :             protein of unknown function DUF195
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  458/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:405 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   139->315 3biqA PDBj 2e-08 6.8 %
:RPS:PFM   89->369 PF02646 * RmuC 3e-38 35.0 %
:HMM:PFM   89->371 PF02646 * RmuC 3.2e-75 33.0 279/305  
:HMM:PFM   15->144 PF04156 * IncA 0.00016 21.8 119/191  
:BLT:SWISS 81->369 RMUC_XYLFA 3e-16 26.4 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37322.1 GT:GENE ABE37322.1 GT:PRODUCT protein of unknown function DUF195 GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 97298..98515 GB:FROM 97298 GB:TO 98515 GB:DIRECTION + GB:PRODUCT protein of unknown function DUF195 GB:PROTEIN_ID ABE37322.1 GB:DB_XREF GI:91681020 InterPro:IPR003798 LENGTH 405 SQ:AASEQ MNETLFYLGDAPVSIGAALFGASAMALLLLLAIVLVIAHGLQSGSAAALAQARRASDLEQRLSGLIRFQSEANGRVDAMGRALAGRQAEMARAVSERLDTVTHRVGQSMTQSTRHTMESLQALHERLGIIDRAHDNLTELTDQVTSLRDVLANKQARGAFGQARMESIVQDGMPKGAYAFQYTLSTGKRPDCVVFLPDQRPLCIDAKFPLEAVTALRESRSDGEKKAASQRLRLDVMRHVDDIAAKYLIPGETQDTALMFVPSESVYAEIHDGFDDVIQRAYRARIVLVSPSLLMLAIQVMQQILKDARMRDAADQIRTEVLSLGDDLARLRERVTKLQTHFGQVNDDVRQILISADKIERRAVRIEELDFSAVEPSTGTQAPLAPEARDLFASRAFKIDEVASD GT:EXON 1|1-405:0| BL:SWS:NREP 1 BL:SWS:REP 81->369|RMUC_XYLFA|3e-16|26.4|277/456| COIL:NAA 34 COIL:NSEG 1 COIL:REGION 311->344| TM:NTM 1 TM:REGION 11->33| SEG 15->55|igaalfgasamalllllaivlviahglqsgsaaalaqarra| RP:PDB:NREP 1 RP:PDB:REP 139->315|3biqA|2e-08|6.8|177/441| RP:PFM:NREP 1 RP:PFM:REP 89->369|PF02646|3e-38|35.0|274/296|RmuC| HM:PFM:NREP 2 HM:PFM:REP 89->371|PF02646|3.2e-75|33.0|279/305|RmuC| HM:PFM:REP 15->144|PF04156|0.00016|21.8|119/191|IncA| OP:NHOMO 467 OP:NHOMOORG 461 OP:PATTERN -------------------------------------------------------------1------ -----1----------------------------------111--1--11111-----11-1-1-------1---1111---------111111111--1-1111----11111111----------1-11111-1---------------------------------------1---1----------11------------------------------------------------------------------------------------111111111111111111111111111111111111111111111111-------------------------------111--11--1----11-11------1111111111--11111111111111111---------111-11111111111111-1-111111111111111111111111-1--------11--------------------11-1--1111111--11----1111--------111111111111-11-1111-1111111111111111--1111--11--1---1----1-11---111111--1-1111------1-1-------11--11111111111-1-1211111111111111111------1------11111111111111111-1111111111111111111111111111111111111111111111111111-1111111111111--1111112111121111111111----1111-----------111111111111111211--111-11--1111111111111112111111111111--------------------1--------1-11-----1---1-------------111 --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------1------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 177 STR:RPRED 43.7 SQ:SECSTR ##########################################################################################################################################HHHHHHHHHHHHGGGcTTcccEEEEEEccccTTcTTcHHHHHHHHHHccccccEEEEEETTEEEEEEHHHHHHHHHHHGGGcccccEEEEEEEcTTcHHHHHHHHHHHHHHHHHHccEEEEcTTcccccHHHHHHHHHHHHHHHHHTcEEEEcHHHHHHHTccccHHHHHHHHHHHH########################################################################################## DISOP:02AL 1-1,49-98,109-123,365-391,403-406| PSIPRED cccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccHHEEEEEEcccccccEEEEEccccccEEEEccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEccHHHHHHHHHccHHHHHHHHHccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHcc //