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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37366.1
DDBJ      :             polyhydroxyalkanoate depolymerase, intracellular
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  135/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:441 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   151->229 3cmmC PDBj 8e-04 11.4 %
:RPS:PDB   270->347 2aniA PDBj 7e-07 20.3 %
:HMM:SCOP  123->428 1k8qA_ c.69.1.6 * 5.6e-31 21.8 %
:RPS:PFM   230->428 PF06850 * PHB_depo_C 9e-74 60.8 %
:HMM:PFM   230->429 PF06850 * PHB_depo_C 3.1e-108 68.5 200/203  
:HMM:PFM   196->213 PF06380 * DUF1072 0.00032 44.4 18/39  
:BLT:SWISS 146->229 KSGA_CAUCR 7e-04 35.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37366.1 GT:GENE ABE37366.1 GT:PRODUCT polyhydroxyalkanoate depolymerase, intracellular GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(144990..146315) GB:FROM 144990 GB:TO 146315 GB:DIRECTION - GB:PRODUCT polyhydroxyalkanoate depolymerase, intracellular GB:PROTEIN_ID ABE37366.1 GB:DB_XREF GI:91681064 InterPro:IPR009656 InterPro:IPR010915 LENGTH 441 SQ:AASEQ MPVIGEFGRPPEMPAEVSPAMTTPMYWFYELAHASLNPARAMSDAARLMFKNPLNPWSHTDLGKSIAAACEVFERTTRRYGKPEWGLDDTEVNGMRVPIEIHNVWEKPFCRLLYFERKLEHPLRHPQPRVLIVAPMSGHYATLLRGTVEAFLPTHEVYIADWTDARMVPVAAGRFDLDDYVDYVIEMLQTLGGNVHVVAVCQPSVPVLAAVSVMEANDDPFVPLSMTLMGGPIDTRRNPTSVNNLAAEKGIDWFRSHVITKVPFPHPGVMRDVYPGFLQLNGFISMNLDRHMDAHKNLFNHLVQGDGDLADKHREFYDEYLAVMDLTAEFYLQTVDLVFVKHALPKGEMTHRGKLVEPSKIKRVALMTVEGENDDISGLGQTEATHTLCTSIPDERRVHYVQKGVGHYGVFNGSRFRSEIVPRISDFMLSSASGARATAAE GT:EXON 1|1-441:0| BL:SWS:NREP 1 BL:SWS:REP 146->229|KSGA_CAUCR|7e-04|35.8|81/100| RP:PDB:NREP 2 RP:PDB:REP 151->229|3cmmC|8e-04|11.4|79/1006| RP:PDB:REP 270->347|2aniA|7e-07|20.3|69/317| RP:PFM:NREP 1 RP:PFM:REP 230->428|PF06850|9e-74|60.8|199/202|PHB_depo_C| HM:PFM:NREP 2 HM:PFM:REP 230->429|PF06850|3.1e-108|68.5|200/203|PHB_depo_C| HM:PFM:REP 196->213|PF06380|0.00032|44.4|18/39|DUF1072| HM:SCP:REP 123->428|1k8qA_|5.6e-31|21.8|298/0|c.69.1.6|1/1|alpha/beta-Hydrolases| OP:NHOMO 213 OP:NHOMOORG 135 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1111-----4322211111111------------34433432111-11111112111123-111111111111--------1----111-------------111-111-1--1-----1111-111113333322222233332222123421352121112211112212111------------------------------------------------------------------------------------11------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------1111111111--------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 148 STR:RPRED 33.6 SQ:SECSTR ######################################################################################################################################################cHHHHHHHHHHHHHHHHHcHHHHcTTccccHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEc########################################HTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcGGGccH##HHHHHHH#######HHHHHHHHHHHHHHHcccc############################################################################################## DISOP:02AL 1-1,7-7,431-442| PSIPRED cccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccHHHHHHHHHHHHHHHccccccccccccEEEEccEEcccccEEEEEcccEEEEEEEEcccccccccccEEEEEccccccEEHHHHHHHHHHHccccEEEEEcccHHHccHHHccccHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHcccccccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccEEEccEEccHHHcccccEEEEEcccccccccHHHHHHHHHHccccHHHcEEEccccccEEEEEcccHHHHHccHHHHHHHHHHcccccccccc //