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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37375.1
DDBJ      :             transcriptional regulator, AraC family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  227/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.24.16a.4.1
:329 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   145->207 2e2iA PDBj 7e-04 27.9 %
:RPS:PDB   221->320 1bl0A PDBj 5e-16 17.3 %
:RPS:SCOP  221->320 1v4aA1  a.24.16.4 * 6e-14 11.2 %
:HMM:SCOP  219->272 1d5yA1 a.4.1.8 * 2e-06 22.2 %
:HMM:SCOP  273->324 1d5yA2 a.4.1.8 * 1.9e-07 30.0 %
:HMM:PFM   289->321 PF00165 * HTH_AraC 6.1e-06 21.9 32/42  
:BLT:SWISS 76->322 THCR_RHOER 2e-18 29.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37375.1 GT:GENE ABE37375.1 GT:PRODUCT transcriptional regulator, AraC family GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 154717..155706 GB:FROM 154717 GB:TO 155706 GB:DIRECTION + GB:PRODUCT transcriptional regulator, AraC family GB:PROTEIN_ID ABE37375.1 GB:DB_XREF GI:91681073 InterPro:IPR000005 LENGTH 329 SQ:AASEQ MTVELLSEPLSEFRALDTSDPVELAQALWTVYGVRHFEAPPAGHFRIRGNFIQLQDIALGFTSGHAPLTVDFPEADFARLQIGLAGQASTRSAGVTTAVDSRQGCITSPGRTARTEFGETYEQLLLRVKNGALERKLSALLGTKPKRTIEFEPAATNDLPQAANLRRMIAFVSSQINSPSAPLPALVLAELQDAITLLLLSTYRHNFSRFLEADSPTAAPKHVRKIEEYIEANWMKPITIETLVDLTGISARGVFKTFQRNRGYSPMAFAKQVRLQHARAMLTQGRTQTTVTAAAFACGFANLGHFAKDYRELFGERPSETLGRSSTSL GT:EXON 1|1-329:0| BL:SWS:NREP 1 BL:SWS:REP 76->322|THCR_RHOER|2e-18|29.7|246/332| RP:PDB:NREP 2 RP:PDB:REP 145->207|2e2iA|7e-04|27.9|61/1411| RP:PDB:REP 221->320|1bl0A|5e-16|17.3|98/116| HM:PFM:NREP 1 HM:PFM:REP 289->321|PF00165|6.1e-06|21.9|32/42|HTH_AraC| RP:SCP:NREP 1 RP:SCP:REP 221->320|1v4aA1|6e-14|11.2|98/151|a.24.16.4| HM:SCP:REP 219->272|1d5yA1|2e-06|22.2|54/54|a.4.1.8|1/2|Homeodomain-like| HM:SCP:REP 273->324|1d5yA2|1.9e-07|30.0|50/0|a.4.1.8|1/1|Homeodomain-like| OP:NHOMO 491 OP:NHOMOORG 228 OP:PATTERN -------------------------------------------------------------------- ----1----------------2---2------2---21A3---------21-----------1-21-1---------------------1---------------1---------------------------------1--------1--------1-----------1--------------------------------------------------------------2----------------------------------------------------------------------------------------------1------------11-----------1---------------------21---------12241--513341111111-112-11-1111-12--8--2678457-1-----112211111311111111---------------------------------------1C------2867A78222227733222214C552331----3-1---2---33-----11------------162-----11---2----11----1-1--1--------------------------------221-------1---------------1----------------1-1----1111111111-1111112111111111111211-----2111111112112111-111-111-----------------------------2-5---1-2---------33333-3---1-44344556-33461112-------------11-11----1-11-------------------------------------------------------------------1--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 174 STR:RPRED 52.9 SQ:SECSTR ################################################################################################################################################ccccEEEcGGGHHHccccHHHHHHHTcGGGGcEETTTTEEcccc##cHHHEccHHHHHTTTTcGGGHHTTccHHHHHHHHHHHHHHHTTTTcccccHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccHHccHHHHHHHTTcccHHHHHHHHHHHHcccHHH######### DISOP:02AL 1-3,206-221,328-330| PSIPRED cccccccHHcccccccccccHHHHHHHHHHHHcccccccccccccEEEEEEEEEccEEEEEEEccccEEEEcccccEEEEEEEEccEEEEEEccEEEEEcccEEEEEccccEEEEEEccccEEEEEEEcHHHHHHHHHHHccccccccccccHHHHccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccHHcccccccccHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHcc //