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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37392.1
DDBJ      :             DNA repair protein RadC
Swiss-Prot:RADC_RHOP2   RecName: Full=DNA repair protein radC homolog;

Homologs  Archaea  9/68 : Bacteria  679/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.60.2c.97.3
:239 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   124->239 2qlcE PDBj 5e-20 37.9 %
:RPS:PDB   8->98 3c1yA PDBj 6e-06 18.5 %
:RPS:SCOP  164->205 1oi0A  c.97.3.1 * 3e-04 23.8 %
:HMM:SCOP  29->108 2a1jB1 a.60.2.5 * 7.4e-07 29.5 %
:RPS:PFM   117->232 PF04002 * DUF2466 1e-32 50.9 %
:HMM:PFM   118->236 PF04002 * DUF2466 1.1e-46 47.1 119/123  
:BLT:SWISS 1->238 RADC_RHOP2 e-127 95.0 %
:PROS 188->193|PS01302|UPF0758

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37392.1 GT:GENE ABE37392.1 GT:PRODUCT DNA repair protein RadC GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(170705..171424) GB:FROM 170705 GB:TO 171424 GB:DIRECTION - GB:PRODUCT DNA repair protein RadC GB:PROTEIN_ID ABE37392.1 GB:DB_XREF GI:91681090 InterPro:IPR001405 LENGTH 239 SQ:AASEQ MPANSDEQLSQSGFAEAPHYHGHRERLRERFREAGADALSDYELLEMVLFRALPRRDVKPLAKALIARFGSFAETMHAPEPRLREVSGLGEAAITEIKLVAAAAARVTKGQVKSRTVLSSWSAVIDYCRTTMAFADKEQFRILFLDKRNQLIADELQQVGTVDHTPVYPREIVKRALELSATAVIMVHNHPSGDPTPSQADIQMTRTIVAIAEPLGVSVHDHIIVGKNGHASLKGLKLI GT:EXON 1|1-239:0| SW:ID RADC_RHOP2 SW:DE RecName: Full=DNA repair protein radC homolog; SW:GN Name=radC; OrderedLocusNames=RPB_0700; SW:KW Complete proteome; DNA damage; DNA repair. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->238|RADC_RHOP2|e-127|95.0|238/250| GO:SWS:NREP 2 GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| PROS 188->193|PS01302|UPF0758|PDOC01006| BL:PDB:NREP 1 BL:PDB:REP 124->239|2qlcE|5e-20|37.9|116/124| RP:PDB:NREP 1 RP:PDB:REP 8->98|3c1yA|6e-06|18.5|81/349| RP:PFM:NREP 1 RP:PFM:REP 117->232|PF04002|1e-32|50.9|116/123|DUF2466| HM:PFM:NREP 1 HM:PFM:REP 118->236|PF04002|1.1e-46|47.1|119/123|DUF2466| RP:SCP:NREP 1 RP:SCP:REP 164->205|1oi0A|3e-04|23.8|42/108|c.97.3.1| HM:SCP:REP 29->108|2a1jB1|7.4e-07|29.5|78/0|a.60.2.5|1/1|RuvA domain 2-like| OP:NHOMO 969 OP:NHOMOORG 689 OP:PATTERN -------------------------------------------11111-1111--------------- ----------------------------------------------------------------------------------11-1111121-1111--11211112111--------------1111221111-2111112221111111111111------11111111-----------------1112-11111121211111111111111112123111111111112111-1111111111111111111111111111111111111-11111111111111111111111111111111111111111111111112111111111111111112112121311111112222111111131111224-2211111112111121111111111111111-11111111122--11111111111131-112211211112222222222221111111111111111--11-21---22-3143-21122111151111111111122111111111121112-12121326322111142111111111111111314231133111111111111-32-2125221-1111-----------------------1111233111121111211311132232221211--12113------11231214337446341-32426261453531142111213222221211111211111112123221---111121111232--11-1--11111-16111111112211-111111111-11112113121122222221111---------12311322422121411424351111111--11--1111--------1-1-------------------------1-11111111-11 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 197 STR:RPRED 82.4 SQ:SECSTR #######cccHHHHHHHTTcc####cccGGGGGGcccccccHHHHHHT######ccccHHHHHHHHHHHccHHHHTTccHHHHTTcTTccHHHHHHHH#########################HHHHHTTccccTTccEEEEEEEcTTccEEEEEEEEcccccGGGccHHHHHHHHHHTTccEEEEEEEcTTccccccHHHHHHHHHHHHHHHHHTcEEEEEEEEccccEEETTTTTcc DISOP:02AL 1-17,194-197| PSIPRED cccccHHHHcccHHHccccccccHHHHHHHHHHccHHHccHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHcccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccEEEEEEEcccccEEEEEEEEEEccccEEEcHHHHHHHHHHHcccEEEEEEEcccccccccHHHHHHHHHHHHHHHHcccEEEEEEEEccccEEEHHHcccc //