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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37402.1
DDBJ      :             phenylalanyl-tRNA synthetase beta subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  890/915 : Eukaryota  11/199 : Viruses  0/175   --->[See Alignment]
a.6.1b.153.1b.40.4d.104.1d.58.13
:824 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->811 2rhsD PDBj 5e-94 30.8 %
:RPS:PDB   21->810 1b70B PDBj 0.0 31.2 %
:RPS:SCOP  65->220 1e7zA  b.40.4.4 * 3e-35 25.3 %
:RPS:SCOP  218->416 1b70B6  b.153.1.1 * 4e-43 38.2 %
:RPS:SCOP  423->495 1b70B2  a.6.1.1 * 3e-14 32.9 %
:RPS:SCOP  493->714 1b70B5  d.104.1.1 * 6e-29 26.6 %
:RPS:SCOP  728->810 1b70B4  d.58.13.1 * 2e-23 19.3 %
:HMM:SCOP  55->222 1ntgA_ b.40.4.4 * 4.9e-46 41.6 %
:HMM:SCOP  216->420 1pysB6 b.153.1.1 * 2.7e-76 48.3 %
:HMM:SCOP  421->495 1pysB2 a.6.1.1 * 4.5e-17 36.0 %
:HMM:SCOP  486->716 1pysB5 d.104.1.1 * 5e-40 34.5 %
:HMM:SCOP  724->823 1pysB4 d.58.13.1 * 2.5e-27 39.0 %
:RPS:PFM   67->166 PF01588 * tRNA_bind 9e-23 54.2 %
:RPS:PFM   236->403 PF03483 * B3_4 6e-50 51.8 %
:RPS:PFM   425->489 PF03484 * B5 8e-06 32.3 %
:RPS:PFM   730->823 PF03147 * FDX-ACB 1e-15 39.4 %
:HMM:PFM   235->406 PF03483 * B3_4 1.6e-67 48.3 172/174  
:HMM:PFM   730->823 PF03147 * FDX-ACB 2e-27 44.7 94/94  
:HMM:PFM   66->167 PF01588 * tRNA_bind 5.8e-24 39.8 93/95  
:HMM:PFM   423->489 PF03484 * B5 4.7e-19 35.8 67/70  
:BLT:SWISS 21->824 SYFB_RHOPA 0.0 84.8 %
:PROS 320->342|PS00132|CARBOXYPEPT_ZN_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37402.1 GT:GENE ABE37402.1 GT:PRODUCT phenylalanyl-tRNA synthetase beta subunit GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(185997..188471) GB:FROM 185997 GB:TO 188471 GB:DIRECTION - GB:PRODUCT phenylalanyl-tRNA synthetase beta subunit GB:PROTEIN_ID ABE37402.1 GB:DB_XREF GI:91681100 InterPro:IPR000834 InterPro:IPR002547 InterPro:IPR004532 InterPro:IPR005121 InterPro:IPR005146 InterPro:IPR005147 LENGTH 824 SQ:AASEQ MSQLQHSARRQHSARRKSQPMKLTLSWLKDHLDTDETLTALADKLTMIGLEVEDITDKAKALAPFTIARVLSAEKHPNADKLQVCSVDTGDGGAPVQVVCGAPNARAGLITVFSPPGTFIPGKNITLGVGNIRGVESRGMLCSAAELQISEDHDGIMELPADAPIGKAYAEWAGLGDPVLDINLTPNRQDCAGVHGIARDLAAADMGKLKESGIKPIKGEFPCPVQVSVEDDKLCPGFALRLVRGVKNGPSPEWLQKRLTAIGLRPINALVDITNFLTFDRSRPLHVFDAAKVKGNLVVRRARDGETLLALDGRNYNLDPGVCVIADDHGVESLAGIMGGEASGCSAETTDVLIESALWNEINIAQSGRKLGINTDARYRFERGVDPAFMVPGLDLATRLVIEFCGGTPSEMVVVGRTFGDDRIIDFPLSEVKRLAGIDVPLAEARRILTHLGFMVAGQGAVVKVAAPSWRSDVHGKADIVEEIVRIVGVDKVPMTPFERGDAPRKPVLTPIQTRTRRAKRALAARGLTEAVTWSFIAKPSAEAFGGGQPELALANPIASDLSDMRPSLLPGLVAAAQANADRGTPDLALFEVGQIFKGDRPQDQFVAASGVRRGVASSNGLGRHWSGSAPASALDAKADAFAVLAAAGAPMAGLQIATGKALPAWLHPGRSGAIQIGPQNVLGYFGELHPRVLEQLHADGPLVGFEVILDNIPAAKQRPTRAKPSLELSAFQPVSRDFAFIVDRKVQAADIVRAAQSIDKKLISSVVVFDVYEGKGVDPDKKSVAIAVSLQPRDKTMTDQEIDAVGAKIVAEVTKKTGGVLRG GT:EXON 1|1-824:0| BL:SWS:NREP 1 BL:SWS:REP 21->824|SYFB_RHOPA|0.0|84.8|803/803| PROS 320->342|PS00132|CARBOXYPEPT_ZN_1|PDOC00123| SEG 456->467|vagqgavvkvaa| SEG 514->526|trtrrakralaar| SEG 628->653|gsapasaldakadafavlaaagapma| BL:PDB:NREP 1 BL:PDB:REP 21->811|2rhsD|5e-94|30.8|766/785| RP:PDB:NREP 1 RP:PDB:REP 21->810|1b70B|0.0|31.2|763/775| RP:PFM:NREP 4 RP:PFM:REP 67->166|PF01588|9e-23|54.2|96/100|tRNA_bind| RP:PFM:REP 236->403|PF03483|6e-50|51.8|168/172|B3_4| RP:PFM:REP 425->489|PF03484|8e-06|32.3|65/70|B5| RP:PFM:REP 730->823|PF03147|1e-15|39.4|94/94|FDX-ACB| HM:PFM:NREP 4 HM:PFM:REP 235->406|PF03483|1.6e-67|48.3|172/174|B3_4| HM:PFM:REP 730->823|PF03147|2e-27|44.7|94/94|FDX-ACB| HM:PFM:REP 66->167|PF01588|5.8e-24|39.8|93/95|tRNA_bind| HM:PFM:REP 423->489|PF03484|4.7e-19|35.8|67/70|B5| GO:PFM:NREP 15 GO:PFM GO:0000049|"GO:tRNA binding"|PF01588|IPR002547| GO:PFM GO:0003723|"GO:RNA binding"|PF03483|IPR005146| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF03483|IPR005146| GO:PFM GO:0006412|"GO:translation"|PF03483|IPR005146| GO:PFM GO:0000287|"GO:magnesium ion binding"|PF03484|IPR005147| GO:PFM GO:0003723|"GO:RNA binding"|PF03484|IPR005147| GO:PFM GO:0005524|"GO:ATP binding"|PF03484|IPR005147| GO:PFM GO:0006412|"GO:translation"|PF03484|IPR005147| GO:PFM GO:0006432|"GO:phenylalanyl-tRNA aminoacylation"|PF03484|IPR005147| GO:PFM GO:0000049|"GO:tRNA binding"|PF03147|IPR005121| GO:PFM GO:0000287|"GO:magnesium ion binding"|PF03147|IPR005121| GO:PFM GO:0004826|"GO:phenylalanine-tRNA ligase activity"|PF03147|IPR005121| GO:PFM GO:0005524|"GO:ATP binding"|PF03147|IPR005121| GO:PFM GO:0006432|"GO:phenylalanyl-tRNA aminoacylation"|PF03147|IPR005121| GO:PFM GO:0008033|"GO:tRNA processing"|PF03147|IPR005121| RP:SCP:NREP 5 RP:SCP:REP 65->220|1e7zA|3e-35|25.3|146/173|b.40.4.4| RP:SCP:REP 218->416|1b70B6|4e-43|38.2|199/209|b.153.1.1| RP:SCP:REP 423->495|1b70B2|3e-14|32.9|73/75|a.6.1.1| RP:SCP:REP 493->714|1b70B5|6e-29|26.6|203/207|d.104.1.1| RP:SCP:REP 728->810|1b70B4|2e-23|19.3|83/94|d.58.13.1| HM:SCP:REP 55->222|1ntgA_|4.9e-46|41.6|161/0|b.40.4.4|1/1|Nucleic acid-binding proteins| HM:SCP:REP 216->420|1pysB6|2.7e-76|48.3|205/209|b.153.1.1|1/1|PheT/TilS domain| HM:SCP:REP 421->495|1pysB2|4.5e-17|36.0|75/75|a.6.1.1|2/2|Putative DNA-binding domain| HM:SCP:REP 486->716|1pysB5|5e-40|34.5|206/207|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 724->823|1pysB4|2.5e-27|39.0|100/104|d.58.13.1|1/1|Anticodon-binding domain of PheRS| OP:NHOMO 1031 OP:NHOMOORG 901 OP:PATTERN -------------------------------------------------------------------- 1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112222222222222222222222222222222222222221122222222222222222222221222222222222221222122222222222222222222222221222222222222222222222211111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111-111111-1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111----------111212-1-1--11----112-11121111111111111 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------1-1--1--1--1--1-----1111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 803 STR:RPRED 97.5 SQ:SECSTR ####################cEEEHHHHHTTcTTcccHHHHHHHHHHHTccEEEEEEcccccTTEEEEEEEEEEEETTTTTEEEEEEEccccccEEEEEEccccccTTcEEEEEcTTccccccccccccEEccccEEccEEccHHHHTccccccccccccTTcccTTccGGGTccccEEEEEcccTTcGGGGcHHHHHHHHHHTTTcccccccccccEEccccccEEEEccTTTccEEEEEEEEccccccccHHHHHHHHHTTcccccHHHHHHHHHHHHccccEEEEEGGGTcTEEEEEEccTTcEEEcTTccEEEccTTcEEEEEEETTEEETTTEEcTTTcccTTccEEEEEEEEccHHHHHHHHHHTTcccHHHHHHHHcccTTcHHHHHHHHHHHHHHHTccEEEcccEEEccccccccEEEcHHHHHHHHTccccHHHHHHHHHHTTcEEEcccccEEEEccTTccccccHHHHHHHHHHHHcGGGcccccccccccGGGccTTHHHHHHHHHHHHHHHHTcEEcccccEEcTTHHHHTTcccccccccccccGGGcEEccccHHHHHHHHHHHHHHcccccEEEEEEEEEccccEEEEEEEEEEEEEcccEEccccccHHHHTTTTcEEccHHHHHHHHHHHHHHHTcccEEEccccTTccTTcccEEEETTEEEEEEEEEccHHHHHHTTcccccEEEEEEEcHHHHHHTccccccccccccccccEEEEEcccEEccccHHHHHHHHHHHccTTEEEEEEEEccccTTccTTEEccEEEEEEccccccccHHHHHHHHHHHccccEEETTEEcc# DISOP:02AL 1-14| PSIPRED ccHHHHHHHHHcccEEEcccccccHHHHHHHccccccHHHHHHHHHHccccHHHccccccccccEEEEEEEEEEEcccccEEEEEEEEEccccEEEEEEcccHHHHcccEEEEEccccEEEcccEEEEEEEEcccEEEEEEEcHHHcccccccccEEEccccccccccccccccccccEEEEEccccHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEccccccEEEEEEEEcccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccEEEHHHHcccEEEEEEccccEEEEEccEEEEcccccEEEEccccEEEEccccccccccccccccEEEEEEEcccHHHHHHHHHHHcccHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEccccccccEEEEEHHHHHHHHcccccHHHHHHHHHHcccEEcccccEEEEcccccccccccHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEcccccHHHHHHHccccEEEEcccccccccccccHHHHccccHHHHHHHccccccccEEEEEEcccccccccccEEEEEEccEEEEEEEEEEcHHHHHHccccccEEEEEEcHHHHHHHHcccccccccccccccccccccEEEEEcccccHHHHHHHHHHccccEEEEEEEEEEEcccccccccEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHccEEcc //