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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37403.1
DDBJ      :             protein of unknown function DUF559
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  130/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.52.1
:194 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   57->149 3hrlA PDBj 3e-12 43.9 %
:RPS:PDB   46->153 1cw0A PDBj 8e-08 17.1 %
:RPS:SCOP  42->153 1cw0A  c.52.1.15 * 5e-17 17.4 %
:HMM:SCOP  38->175 1cw0A_ c.52.1.15 * 5.9e-19 20.0 %
:RPS:PFM   68->154 PF04480 * DUF559 2e-20 52.9 %
:HMM:PFM   46->153 PF04480 * DUF559 1.7e-39 48.1 106/109  
:BLT:SWISS 41->158 Y1162_HAEIN 2e-22 43.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37403.1 GT:GENE ABE37403.1 GT:PRODUCT protein of unknown function DUF559 GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(188553..189137) GB:FROM 188553 GB:TO 189137 GB:DIRECTION - GB:PRODUCT protein of unknown function DUF559 GB:PROTEIN_ID ABE37403.1 GB:DB_XREF GI:91681101 InterPro:IPR007569 LENGTH 194 SQ:AASEQ MMKALSSPHDALPRPLAGEGWGEGDTGTELAMDDPKQPSWNVSPSLRRHARELRKTSTDAERLMWSALRDKQLNGFSFRRQVPIGPFIADFACHSVKLVVEIDGGQHFSDDAERADASRTALIEARGFRIVRFSNAEVMSNRDGVLQSIAAELAASAPTPTLPRKRERERAKRAAKQRPEQIDSKQRPAAGDAD GT:EXON 1|1-194:0| BL:SWS:NREP 1 BL:SWS:REP 41->158|Y1162_HAEIN|2e-22|43.1|116/157| SEG 18->29|gegwgegdtgte| SEG 163->181|prkrererakraakqrpeq| BL:PDB:NREP 1 BL:PDB:REP 57->149|3hrlA|3e-12|43.9|82/91| RP:PDB:NREP 1 RP:PDB:REP 46->153|1cw0A|8e-08|17.1|105/155| RP:PFM:NREP 1 RP:PFM:REP 68->154|PF04480|2e-20|52.9|87/92|DUF559| HM:PFM:NREP 1 HM:PFM:REP 46->153|PF04480|1.7e-39|48.1|106/109|DUF559| RP:SCP:NREP 1 RP:SCP:REP 42->153|1cw0A|5e-17|17.4|109/155|c.52.1.15| HM:SCP:REP 38->175|1cw0A_|5.9e-19|20.0|135/155|c.52.1.15|1/1|Restriction endonuclease-like| OP:NHOMO 198 OP:NHOMOORG 130 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------1-------------------1--1----------------------2-11---------1----1-311-11211--------2---112---------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------13342-------212-3242475----------------12-12-1-21112213-1211---4--------------------------------------------------------3-24----------------------------------------------1-1----------1111111----1--1--1----------1122-1311--------------------------------------------------------------------1--1-------------1---1---11--111---1-1--111111--1----------------------111-1111-----------------------24-22----111--2-12113-------------1-------1------1----11-1-111-1---------------21111------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 108 STR:RPRED 55.7 SQ:SECSTR #############################################HHHHHHTccccccHHHHHHHHHHHHTTTTTcccEEccTTcTTcccEEEGGGTEEEEEEcTTTTTcccTTHHHHHHHHHHHTTcEEEEEEHHHHccTTcccHHHHHHHH######################################### DISOP:02AL 1-9,48-57,159-195| PSIPRED ccccccccccccccccccccccccccHHHHHHcccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccEEcccEEEEEEEEcccEEEEEEccccccHHHHHHHHHHHHHHHHcccEEEEEEHHHHHHcHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcHHHHHHHccccccccc //