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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37437.1
DDBJ      :             tryptophan synthase, beta chain
Swiss-Prot:TRPB_RHOPS   RecName: Full=Tryptophan synthase beta chain;         EC=4.2.1.20;

Homologs  Archaea  65/68 : Bacteria  753/915 : Eukaryota  123/199 : Viruses  0/175   --->[See Alignment]
c.79.1
:404 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   19->401 1v8zB PDBj e-130 58.7 %
:RPS:PDB   16->398 1a5sB PDBj 6e-98 53.4 %
:RPS:SCOP  16->400 1a50B  c.79.1.1 * 3e-98 53.4 %
:HMM:SCOP  12->400 1qopB_ c.79.1.1 * 6.3e-158 51.5 %
:RPS:PFM   66->372 PF00291 * PALP 7e-25 38.2 %
:HMM:PFM   65->369 PF00291 * PALP 4.2e-41 29.2 260/297  
:BLT:SWISS 1->404 TRPB_RHOPS 0.0 100.0 %
:PROS 91->105|PS00168|TRP_SYNTHASE_BETA

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37437.1 GT:GENE ABE37437.1 GT:PRODUCT tryptophan synthase, beta chain GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 220569..221783 GB:FROM 220569 GB:TO 221783 GB:DIRECTION + GB:PRODUCT tryptophan synthase, beta chain GB:PROTEIN_ID ABE37437.1 GB:DB_XREF GI:91681135 InterPro:IPR001926 InterPro:IPR006653 InterPro:IPR006654 LENGTH 404 SQ:AASEQ MNQILPNSFRSGPDERGHFGIFGGRFVAETLMPLILELEKAYAEAKDDPAFRTEMDGYLKHYVGRPSPLYFAERLTEHFGGAKIYFKREDLNHTGAHKVNNVLGQIMLARRMGKQRIIAETGAGMHGVATATMCAKFGLQCVVYMGAVDVERQQPNVLRMKALGAEVRPVTSGANTLKDAMNEALRDWVTNVHDTFYCIGTVAGPHPYPMMVRDFQEVIGQEVREQILETEGRLPDSLIACIGGGSNAMGLFHPFLDDAGVVIYGVEAAGHGLSKLHAASIAGGKPGVLHGNRTYLLMDDDGQIQEAHSISAGLDYPGIGPEHAWLHDVGRVNFLSATDAEALDAFKLCCRLEGIIPALEPAHALAKVADLAPILPKDHLMVLNMSGRGDKDLASVAEHLGGKF GT:EXON 1|1-404:0| SW:ID TRPB_RHOPS SW:DE RecName: Full=Tryptophan synthase beta chain; EC=4.2.1.20; SW:GN Name=trpB; OrderedLocusNames=RPD_0197; SW:KW Amino-acid biosynthesis; Aromatic amino acid biosynthesis;Complete proteome; Lyase; Pyridoxal phosphate;Tryptophan biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->404|TRPB_RHOPS|0.0|100.0|404/404| GO:SWS:NREP 4 GO:SWS GO:0008652|"GO:cellular amino acid biosynthetic process"|Amino-acid biosynthesis| GO:SWS GO:0009073|"GO:aromatic amino acid family biosynthetic process"|Aromatic amino acid biosynthesis| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| GO:SWS GO:0000162|"GO:tryptophan biosynthetic process"|Tryptophan biosynthesis| PROS 91->105|PS00168|TRP_SYNTHASE_BETA|PDOC00152| BL:PDB:NREP 1 BL:PDB:REP 19->401|1v8zB|e-130|58.7|383/387| RP:PDB:NREP 1 RP:PDB:REP 16->398|1a5sB|6e-98|53.4|382/387| RP:PFM:NREP 1 RP:PFM:REP 66->372|PF00291|7e-25|38.2|272/293|PALP| HM:PFM:NREP 1 HM:PFM:REP 65->369|PF00291|4.2e-41|29.2|260/297|PALP| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF00291|IPR001926| GO:PFM GO:0008152|"GO:metabolic process"|PF00291|IPR001926| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00291|IPR001926| RP:SCP:NREP 1 RP:SCP:REP 16->400|1a50B|3e-98|53.4|384/390|c.79.1.1| HM:SCP:REP 12->400|1qopB_|6.3e-158|51.5|388/390|c.79.1.1|1/1|Tryptophan synthase beta subunit-like PLP-dependent enzymes| OP:NHOMO 1219 OP:NHOMOORG 941 OP:PATTERN 22111-112222222212212122111212122121111111122122222221221121-2111-11 1121212211111111111-12111311111122221222121111111111121111--212111111111111111--11221211221212---111-111111111-11-111-21-----22222222222222222221211211111111111111111112211111111111111111122111111111111-111111111111111221111111111112-1111111111111111111----11-----11--11----1-111-------21111111111111-------------2--111----22-11-------1-12-221---2-2--11122222222112122121111211111-----111111112222211111111111-11111111111-1111111111111111111122222111111111111111212-----------------------------111111111111111111111111111111-1111111111111111222112121122111121111111111212-2122222222222121222242222221122211111111111111111112221211111121211111111111111111111122---122211---111111111111111111-1111111111111112111111111111111111111111111111111111-11111112111111-1111-1111111212111111-11111-1122222211221111111111111112111111111111211111111112111111111111111111121111111----------1-------------------------2213221212122 --11--1-----11111112243454311111111111111111111111221211111211111111-1111211111111111111-12111111111-21112-111-----------------------------------------------------2---------2-1111Q1112151771322131111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 398 STR:RPRED 98.5 SQ:SECSTR #####cEEEEEcTTcccEETTEEEEEccGGGHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHTTcccccEEEcccTTTTccHEEEEEEEGGGcTTccTHHHHHHHHHHHHHHHTccEEEEEEcccHHHHHHHHHHHHHTcEEEEEEEHHHHHHcHHHHHHHHHTTcEEEEEccTTccHHHHHHHHHHHHHHHTTTEEEccccccccTTHHHHHHHTTTHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHGGGTTcTTcEEEEEEEEETcGGcccccHHHHcEEEEETEEEEEEcccTTccccccccccGGGccccccHHHHHHHHTTcEEEEEEEHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcTccEEEEEEEccccGGGTTGGGcHcHHT# DISOP:02AL 1-6| PSIPRED ccccccccHHccccccccccccccEEccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccEEEcccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHccccccEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccEEEEcccHHHccccccccccccccccccccccccHHHHHHHHcccEEEEEEcHHHHHHHHHHHHHHcccEEcccHHHHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHcccc //