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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37500.1
DDBJ      :             perplasmic binding protein of ABC transporter
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  86/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.19c.94.1
:373 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   76->339 1b1xA PDBj 5e-20 9.9 %
:RPS:SCOP  65->353 1dioA  c.1.19.3 * 2e-12 10.4 %
:HMM:SCOP  62->316 1us5A_ c.94.1.1 * 3.7e-18 21.7 %
:RPS:PFM   235->270 PF09084 * NMT1 8e-04 36.1 %
:HMM:PFM   77->275 PF09084 * NMT1 4.8e-28 27.6 196/216  
:BLT:SWISS 172->337 PCDG6_HUMAN 8e-04 30.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37500.1 GT:GENE ABE37500.1 GT:PRODUCT perplasmic binding protein of ABC transporter GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(299022..300143) GB:FROM 299022 GB:TO 300143 GB:DIRECTION - GB:PRODUCT perplasmic binding protein of ABC transporter GB:PROTEIN_ID ABE37500.1 GB:DB_XREF GI:91681198 LENGTH 373 SQ:AASEQ MTPAFLLRALTGAVAVALLAVPVHASPPPAPEKPVEKPAPPPPPKKPPPPVVQPVRKVPEGGFDKVSFGTNWVAEGEHGGFFQAVADDTYKSYGLNVTIVPGGPNVNNRALLLAGKLDFFMTANTLQSFDAVANNVPVVAIAAVFQKDPQVFLTHPESKVGQLDDLKRLTLFVSKEGIASYFQWLKSEYGFNEAKVKPYTSNPQPFIVDRNAAMQGYVTSEPFVIEQKAKFKPSVLLLADYGLDGYSTLIETRRDLIDKNPDMIQRFVDASMIGWYNYLYGDNAAGNALIKSLNPEMTDEMLAYSVAKMKEYGIVDSGDTLRNGIGAMSDERYASFFDKMSRAGVVKRDLDFRQAYTLQFTNKGVGVDLRPSR GT:EXON 1|1-373:0| BL:SWS:NREP 1 BL:SWS:REP 172->337|PCDG6_HUMAN|8e-04|30.7|140/100| TM:NTM 1 TM:REGION 3->24| SEG 13->59|avavallavpvhaspppapekpvekpapppppkkppppvvqpvrkvp| SEG 131->144|avannvpvvaiaav| RP:PDB:NREP 1 RP:PDB:REP 76->339|1b1xA|5e-20|9.9|262/689| RP:PFM:NREP 1 RP:PFM:REP 235->270|PF09084|8e-04|36.1|36/200|NMT1| HM:PFM:NREP 1 HM:PFM:REP 77->275|PF09084|4.8e-28|27.6|196/216|NMT1| RP:SCP:NREP 1 RP:SCP:REP 65->353|1dioA|2e-12|10.4|278/551|c.1.19.3| HM:SCP:REP 62->316|1us5A_|3.7e-18|21.7|249/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 111 OP:NHOMOORG 86 OP:PATTERN -------------------------------------------------------------------- -------------------------------------1-----1--------------------------------------1-----------------------------------------------------111-----3--------22---------------1--------------------------------------1----------------------2----------------------------------------------------------------------------------------------------------------------------------------------11111-----1121211211111----------2-22-22-2--11-2--111-111--31---21--------111111111-----1------------------------------------1---------------------------2----------1-------21------1---------------1-2---11--1----1-1----------11----------------------21-----11--------1---------------------------------------------------------------------222----------------------------------------------------------------------------------1--------------1--1---------------------------------------------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 301 STR:RPRED 80.7 SQ:SECSTR ################################################################EEEEEEEHHHHHHHHHHHHHHHHHHHHTTcccEEEEEcccHHHHHHHHHTTccccEEEcHHcTTTcEEEEEEEEcccccccccEEEEEEEEETTccccGGGcTTcEEEEccTTcTTTTHHHHHHcHHHHccccTTccHHHHHHHHccEEEcTTccTTTcGGGTTTccccTTTTTcccTTcTTcHHHHHHHHHHTTcccEEEEEccHHHHHcccHHHHTTEEHEEEETTTEEEEGGGTTTcccEEEEccEEEEEcccccHHHHHHHHHHHHHHHcTccEEEEccTTccHHHHHcHHHHHHHH######## DISOP:02AL 1-1,28-50,370-370,372-374| PSIPRED ccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHcccccccEEEEEEccEEccccHHHHHHHHccHHHHcccEEEEEEccccccHHHHHHcccEEEEEEcccHHHHHHHcccccEEEEEEEEccccEEEEEEcccccccHHHccccEEEEccccHHHHHHHHHHHccccHHHEEEccccHHHHHcccccEEEEEEEccHHHHHHHcccccEEEEEcccccccccEEEEEcHHHHHHcHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccHHHcccccccHHHHHHHHHHHHHcccccccccHHHcccHHHHcccccccccccc //