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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37509.1
DDBJ      :             short-chain dehydrogenase/reductase SDR
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  190/915 : Eukaryota  29/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:260 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   25->257 1edoA PDBj 2e-14 31.4 %
:RPS:PDB   4->259 1dohB PDBj 2e-21 22.0 %
:RPS:SCOP  25->259 1pwxA  c.2.1.2 * 1e-26 18.1 %
:HMM:SCOP  1->256 1zemA1 c.2.1.2 * 3.4e-67 40.1 %
:RPS:PFM   23->122 PF00106 * adh_short 2e-09 36.5 %
:HMM:PFM   8->181 PF00106 * adh_short 5.3e-34 32.9 161/167  
:BLT:SWISS 25->259 DHK2_STRVN 5e-22 35.5 %
:PROS 150->178|PS00061|ADH_SHORT
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37509.1 GT:GENE ABE37509.1 GT:PRODUCT short-chain dehydrogenase/reductase SDR GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(309048..309830) GB:FROM 309048 GB:TO 309830 GB:DIRECTION - GB:PRODUCT short-chain dehydrogenase/reductase SDR GB:PROTEIN_ID ABE37509.1 GB:DB_XREF GI:91681207 InterPro:IPR001509 InterPro:IPR002198 InterPro:IPR002347 InterPro:IPR013120 LENGTH 260 SQ:AASEQ MAKAGLNVIVTGSASGLGAATAKILARDGARLVINYSSSQKDAETTAEDCRKAGAAEVVVVQGDVAKDDDCKRIVEAAAHWGGLDALINNAGITKHVAHHLLDQLSAEDFQRIYAVNTIGPYQMVRAARALLVAGAKAAGRSSAVVNVSSVAGTSGIGSSIAYAASKGALNTMTLSLSRALAPSIRVNAICPGYIDTPWFTKGRGADAAQQVRDMVVAKVPLKIASSPEDIAELVCFLASPKSSSMTGELVRMDAGMHLG GT:EXON 1|1-260:0| BL:SWS:NREP 1 BL:SWS:REP 25->259|DHK2_STRVN|5e-22|35.5|220/249| PROS 150->178|PS00061|ADH_SHORT|PDOC00060| SEG 11->22|tgsasglgaata| SEG 125->169|vraarallvagakaagrssavvnvssvagtsgigssiayaaskga| BL:PDB:NREP 1 BL:PDB:REP 25->257|1edoA|2e-14|31.4|220/244| RP:PDB:NREP 1 RP:PDB:REP 4->259|1dohB|2e-21|22.0|246/271| RP:PFM:NREP 1 RP:PFM:REP 23->122|PF00106|2e-09|36.5|96/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 8->181|PF00106|5.3e-34|32.9|161/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 25->259|1pwxA|1e-26|18.1|221/252|c.2.1.2| HM:SCP:REP 1->256|1zemA1|3.4e-67|40.1|247/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 299 OP:NHOMOORG 232 OP:PATTERN -----12-22222121------------------------------1-------1---------1--- 1-2-2--1-------------------------1112------1--2-----1-------1--------11---------1-3-1-------------------1311-----------------1----1--------12--------1--1--------------112------------------21---2222222232222222--3312222-211-11------121-------11---1--22---1----------1---------------------------------------------------------211121111111111--111111-1----1---22-----1-11111---1-21111-------211---1111111111111111-------22--1-1111-111-1---1-1-1------------------11----1----------------1---------------1---1---111111-----113-------113-----------------1--------1----------------------------1-----1----21-2--------------------------1------------2--------------------------1-------------------------------------------------111-----------------------------------------------------------------------11111-1---21-----------1-1----------------1---------------------------1-------------------------------------------1-1-1-111-1- --------------1-2--2-11-1--11--------------11111111---------------------------------1----1--2-----------1---1-1-----------------------------------------------1--1-----1-2------1--------1----1-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 260 STR:RPRED 100.0 SQ:SECSTR GccTTcEEEETTTTcHHHHHHHHHHHHTTcEEEEEEcccHHHHHHHHHHHHHHTTccEEEEEccTTcHHHHHHHHHHHHHHccccEEEEccccccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHccTTcEEEEEccGGGTcccccccHHHHHHHHHHHHHHHHHHHHHGGGcEEEEEEEcccccHHHHHHGGGGcHHHHHHHHHHccTTcccccHHHHHHHHHHHHcGGGTTccccEEEEccccccc PSIPRED ccccccEEEEEcccccccHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHccccEEEEccccccccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHcccccHHHHHHHHHcccccccccHHHHHHHHHHHHcHHHccccccEEEEccccccc //