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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37518.1
DDBJ      :             transcriptional regulator, CarD family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  266/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.34.18c.126.1
:432 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  241->337 1em8B  c.126.1.1 * 8e-07 14.5 %
:HMM:SCOP  233->309 2eyqA1 b.34.18.1 * 3.1e-16 31.6 %
:RPS:PFM   244->320 PF02559 * CarD_TRCF 2e-08 39.0 %
:HMM:PFM   244->352 PF02559 * CarD_TRCF 1.7e-24 36.5 96/98  
:BLT:SWISS 244->390 YDEB_BACSU 1e-13 26.5 %
:PROS 10->20|PS00639|THIOL_PROTEASE_HIS
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37518.1 GT:GENE ABE37518.1 GT:PRODUCT transcriptional regulator, CarD family GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(319035..320333) GB:FROM 319035 GB:TO 320333 GB:DIRECTION - GB:PRODUCT transcriptional regulator, CarD family GB:PROTEIN_ID ABE37518.1 GB:DB_XREF GI:91681216 InterPro:IPR000169 InterPro:IPR003711 LENGTH 432 SQ:AASEQ MCYIWHILETRHAVFAAGKGSRQKQRTGAWRFHAQAVSQKTRKMSVSSKRAKHAAAANRSATKSQSRISAKDTRSVKSPASKASGSKASSSKSPVSKASATKASATKAVGSKSSVSKASASKASTSKASAGKAAAAKVTAGKASAAKVTTAKGSAAKASASKASALKSSKNKRSEMPSKTAKTAAPADASKTASAKSTAKPVAKAPEAPKAAVAKPEGKPVAAKPAAPPKVEEPKKAVTQRQGFKAGEFVVYPAHGVGQILAIEEQEIAGAKLELFVINFIKDKMTLRVPTAKVANVGMRKLSDPALVKKALETLKGRARVKRTMWSRRAQEYEAKINSGDIVAIAEVVRDLFRSESQPEQSYSERQLYEAALDRLSREIAVVQQVTETEAVKEVEGQLAKSPRRGAKAEVDAEGDADGDVDTDDAVTDEAA GT:EXON 1|1-432:0| BL:SWS:NREP 1 BL:SWS:REP 244->390|YDEB_BACSU|1e-13|26.5|147/153| PROS 10->20|PS00639|THIOL_PROTEASE_HIS|PDOC00126| SEG 45->64|svsskrakhaaaanrsatks| SEG 75->170|svkspaskasgskassskspvskasatkasatkavgskssvskasaskastskasagkaaaakvtagkasaakvttakgsaakasaskasalkssk| SEG 177->238|psktaktaapadasktasakstakpvakapeapkaavakpegkpvaakpaappkveepkkav| SEG 406->431|gakaevdaegdadgdvdtddavtdea| RP:PFM:NREP 1 RP:PFM:REP 244->320|PF02559|2e-08|39.0|77/100|CarD_TRCF| HM:PFM:NREP 1 HM:PFM:REP 244->352|PF02559|1.7e-24|36.5|96/98|CarD_TRCF| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF02559|IPR003711| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF02559|IPR003711| RP:SCP:NREP 1 RP:SCP:REP 241->337|1em8B|8e-07|14.5|83/110|c.126.1.1| HM:SCP:REP 233->309|2eyqA1|3.1e-16|31.6|76/0|b.34.18.1|1/1|CarD-like| OP:NHOMO 289 OP:NHOMOORG 266 OP:PATTERN -------------------------------------------------------------------- -111111111111111111-1111111111111111112111111121122111111111111111111111111111-------------------------------------------------------------------------------------------------------------------1111-1122111112122--21113-------------1-------------------------------------------------------------------------------------------111-1-------2-11---------1111--1133121-1111---1------111111111111111111111111111111111-1111111111111111111111111111111111111111111111111111111----------111111111111111----111111-----------------------------------------------------------------------11111111111111--------1-22222111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111111-1---1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 19-26,39-137,149-239,359-362,405-413,426-426,429-433| PSIPRED ccEEEEEHHHHHHHHHcccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHccHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHccccccccccccccHHHHcccccccccEEEccccccHHccHHHHHHHHHcccHHHHcccHHcccccccccccccccccccccHHHccccccHHcccccccccccccccccccccHHHHHHHHHccccccEEEcccccEEEEEEEEEEEEccEEEEEEEEEEccccEEEEEEcccHHHcccEEcccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccc //