[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37536.1
DDBJ      :             protein of unknown function DUF949
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  174/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.160.1
:487 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  57->175 1zatA1  b.160.1.1 * 7e-14 13.6 %
:HMM:SCOP  54->175 1y7mA1 b.160.1.1 * 7.2e-07 29.9 %
:RPS:PFM   103->173 PF03734 * YkuD 2e-04 40.8 %
:HMM:PFM   96->175 PF03734 * YkuD 9.6e-07 29.4 68/116  
:HMM:PFM   12->77 PF06474 * MLTD_N 0.00013 24.2 62/95  
:BLT:SWISS 53->254 YAFK_ECOLI 1e-45 44.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37536.1 GT:GENE ABE37536.1 GT:PRODUCT protein of unknown function DUF949 GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 341987..343450 GB:FROM 341987 GB:TO 343450 GB:DIRECTION + GB:PRODUCT protein of unknown function DUF949 GB:PROTEIN_ID ABE37536.1 GB:DB_XREF GI:91681234 InterPro:IPR010355 LENGTH 487 SQ:AASEQ MTRTPLLRALLASAAIAASSLLAGCNSDQMSLATNAKANQPVPPKLVAEMQAKNMDLQSPILVRLFKQEAELEVWKQDRTGVFALLKSYPICRWSGDLGPKVREGDRQAPEGFYAISPGQMNPQSSYYLSFNTGYPNAFDKSLGRTGSQLMVHGDCSSRGCYAMTDEQIAEIYSLGRESFFGGQRAFQLQAYPFKMTPVNFAKHRNNPNMPFWKMLKEGYDHFEVTRQEPKVDFCEHKYVFDAAPPPGSSKPLAFNASAKCPAYSVPADIADAVREKDQKDQTKLAELISKGTPVARLRTGIDGGMHQVFAAKIPDGSTGLSEVDDSSSVALASFDRAPGTIPPTVNPPRRPSDDLLQKATETTSVAAAPATSTSNPPARVASASKDDIGGLLSGLSRRGGSGEITSSTAPTQATARRNEPTPAPPRPHATVPKSADTKQAAAKPQLKPAVELNGATAAKPTTTGTISGAAPVVSSNNFEGRFSAFR GT:EXON 1|1-487:0| BL:SWS:NREP 1 BL:SWS:REP 53->254|YAFK_ECOLI|1e-45|44.0|193/246| SEG 6->23|llrallasaaiaasslla| SEG 360->379|atettsvaaapatstsnppa| SEG 390->403|ggllsglsrrggsg| SEG 439->450|kqaaakpqlkpa| SEG 455->466|gataakptttgt| RP:PFM:NREP 1 RP:PFM:REP 103->173|PF03734|2e-04|40.8|71/136|YkuD| HM:PFM:NREP 2 HM:PFM:REP 96->175|PF03734|9.6e-07|29.4|68/116|YkuD| HM:PFM:REP 12->77|PF06474|0.00013|24.2|62/95|MLTD_N| RP:SCP:NREP 1 RP:SCP:REP 57->175|1zatA1|7e-14|13.6|103/126|b.160.1.1| HM:SCP:REP 54->175|1y7mA1|7.2e-07|29.9|97/0|b.160.1.1|1/1|L,D-transpeptidase catalytic domain-like| OP:NHOMO 207 OP:NHOMOORG 174 OP:PATTERN -------------------------------------------------------------------- -11------------------------------------------------------------------------------------------------------1---1--------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---11111221111111111111111111111-3322423221-112212111113111-1-1-21111-----------------------------------------------------------------------------------------------------------------------------11-------------111-1-1-1------2-------------------------1-------1--------------------------1----------11111111111111111-111111111111211111211111111212121211221211211111111--111111111111---11111111111-1-----------------------------------------------------------1---------------------------1------------------------------------------------------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3,32-32,35-41,43-55,312-330,336-336,339-347,371-381,399-446,487-488| PSIPRED cccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHccccccccEEEEEEEcccEEEEEEccccccEEEEEEEEEEccccccccccccccccccEEEEEEEccccccccccEEEEEcccccHHHHHcccccccEEEEEccccccEEEEcHHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHccccccccHHHHHHHccccHHHHHcccccEEEEccEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccHHHHHHccccccHHHcccccccHHHHHHHHcccccccccccccccHHHHHHHHccccccccccccccccccHHHccccHHHHHHHHHHHHHcccccEEcccccccHHHHHHccccccccccccccccccHHHHHHccccccccccccccccccccccEEEcccccEEEcccccccHHccc //