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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37571.1
DDBJ      :             LrgB-like protein
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  385/915 : Eukaryota  18/199 : Viruses  0/175   --->[See Alignment]
c.1.8
:240 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  183->236 1b30A  c.1.8.3 * 9e-04 34.8 %
:RPS:PFM   39->238 PF04172 * LrgB 1e-38 48.0 %
:HMM:PFM   23->237 PF04172 * LrgB 1.9e-70 43.9 214/215  
:BLT:SWISS 36->239 YOHK_SHIFL 4e-33 36.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37571.1 GT:GENE ABE37571.1 GT:PRODUCT LrgB-like protein GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 385302..386024 GB:FROM 385302 GB:TO 386024 GB:DIRECTION + GB:PRODUCT LrgB-like protein GB:PROTEIN_ID ABE37571.1 GB:DB_XREF GI:91681269 InterPro:IPR007300 LENGTH 240 SQ:AASEQ MSATPFSLWVYLSQTPLLWLTVTLLVYAATDAVSQATERSPLANPVLHAIWIIGAFLWLTGTSYTTYFSGAQFVHFLLGPATVALAVPLYENRRQVIAAIVPMALALVVGCIVAIVSVMVLAQLAGLPETVVLSLASKSVTAGVAMGISESLNADPSLTAVAVVLTGVMGAIMVTPLMNALGIRDFRARGFSVGLASHGIGTARAFQVDAIAGVFAGIAMSLNALITAMLVPVAVTLLVK GT:EXON 1|1-240:0| BL:SWS:NREP 1 BL:SWS:REP 36->239|YOHK_SHIFL|4e-33|36.3|204/231| TM:NTM 6 TM:REGION 14->36| TM:REGION 39->60| TM:REGION 67->88| TM:REGION 111->133| TM:REGION 166->187| TM:REGION 212->234| SEG 17->33|llwltvtllvyaatdav| RP:PFM:NREP 1 RP:PFM:REP 39->238|PF04172|1e-38|48.0|200/215|LrgB| HM:PFM:NREP 1 HM:PFM:REP 23->237|PF04172|1.9e-70|43.9|214/215|LrgB| GO:PFM:NREP 1 GO:PFM GO:0016020|"GO:membrane"|PF04172|IPR007300| RP:SCP:NREP 1 RP:SCP:REP 183->236|1b30A|9e-04|34.8|46/302|c.1.8.3| OP:NHOMO 562 OP:NHOMOORG 413 OP:PATTERN --------------------------------------------------111-1111111------- --------------------------------------------2-1---------1----------------------11-------1111-1------1-----------------------------------11111-----1------------------------------------1-1-----113233332222223322112223223---2111------22222222222222222222221----------1111----1---1112221----22------------------------1-1111111----1211111111111122111111-1--11--111----1-------2-------------11112---1111111111111112-11111111--1-------------11---1-11-11----------------111------------------------------------11--2-1222-----2221------22111121111112-1121111-1-1--1-221111111----111-------12-----11-11----1-11----1--------------------------22112-1-111-1111--11111-11-1------11-------2122222111212221--111111211112111111122211111222222222222222221111111--211111111111---------1111-1-2-2221111111----122222221121-22222221122212111---------1-1112222211111-----------------1----------------1-------------------------------------- -----------------------------------------------------------------1---1-----------11--1-----------------1-----------------------------------------------------------1-----------2---211---1111-1-21----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2| PSIPRED ccccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //