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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37580.1
DDBJ      :             HNH endonuclease
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  265/915 : Eukaryota  16/199 : Viruses  1/175   --->[See Alignment]
d.4.1
:185 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   91->140 2qgpC PDBj 1e-09 53.1 %
:RPS:PDB   91->132 1bxiB PDBj 1e-10 19.5 %
:RPS:SCOP  75->143 1e7dA2  d.4.1.5 * 5e-08 11.6 %
:RPS:PFM   94->133 PF01844 * HNH 7e-09 55.0 %
:HMM:PFM   94->136 PF01844 * HNH 1.2e-16 37.2 43/52  

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37580.1 GT:GENE ABE37580.1 GT:PRODUCT HNH endonuclease GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(395596..396153) GB:FROM 395596 GB:TO 396153 GB:DIRECTION - GB:PRODUCT HNH endonuclease GB:PROTEIN_ID ABE37580.1 GB:DB_XREF GI:91681278 InterPro:IPR002711 InterPro:IPR003615 LENGTH 185 SQ:AASEQ MNAHVSQGGWPVLVLNADFRPLSYYPLSLWSWQDAVKAVFLDRVNIVEHYDRAVHSPTMEFRLPSVVSLKSFVKPSTHPAFTRFNVFLRDRFACQYCGAPEDLTFDHIIPRSKGGQTTWENVVAACSPCNLRKGNLTPIQAKMFPRQTPFAPTVHHLHRNGRMFPPNYLHESWLDYLYWDTELDP GT:EXON 1|1-185:0| BL:PDB:NREP 1 BL:PDB:REP 91->140|2qgpC|1e-09|53.1|49/88| RP:PDB:NREP 1 RP:PDB:REP 91->132|1bxiB|1e-10|19.5|41/129| RP:PFM:NREP 1 RP:PFM:REP 94->133|PF01844|7e-09|55.0|40/49|HNH| HM:PFM:NREP 1 HM:PFM:REP 94->136|PF01844|1.2e-16|37.2|43/52|HNH| GO:PFM:NREP 2 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF01844|IPR002711| GO:PFM GO:0004519|"GO:endonuclease activity"|PF01844|IPR002711| RP:SCP:NREP 1 RP:SCP:REP 75->143|1e7dA2|5e-08|11.6|69/103|d.4.1.5| OP:NHOMO 315 OP:NHOMOORG 282 OP:PATTERN -------------------------------------------------------------------- 111-1---------11111-1111111111111111222211111-1--111121-11--11--1112221-----------1-1----------------------11----------------11-11111-11111111111131221112211111111111123221111111111111111111-----------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------1-11111-----111221111111111111111111-11111111111-1111111111111111111112111111111111111111111-----------------------------11111----------------------------------11---12111111121-------------------11--1-1-1------------------111122---------------------------21---1-1--1------------------------1111------------------------------------------------------------------------------------------------------112----------------------------------------------------------------------11111111111111------1111----------------------------------------------12- ------------------------------------------------------------------------------------------------------------3------------------------------------------------------------------111--1111121-2-111-----1 ------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------ STR:NPRED 71 STR:RPRED 38.4 SQ:SECSTR #####################################################################TcTTTGGGccHHHHHHHHTTccGGGccTTcccccEEEEcccTTTTcccccGGEEEEcHHHHHHHHHccTTT############################################# DISOP:02AL 1-5,7-7| PSIPRED ccccccccccEEEEEEcccEEcccccEEEEEHHHHHHHHHcccccEEEccccEEEEcEEEEEccEEEEEcccccccccHHHHHHHHHHHcccEEEEcccccccEEEEEEEHHccccccHHHHHHHHHHHHcccccccHHHcccccccccccccHHHHHHccEEcccccccHHHHHHccHHHcccc //