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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37588.1
DDBJ      :             3-methylcrotonoyl-CoA carboxylase, alpha subunit
Swiss-Prot:             

Homologs  Archaea  47/68 : Bacteria  836/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
b.84.1b.84.2c.30.1c.92.2d.142.1
:679 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->453 2vpqB PDBj e-112 50.8 %
:BLT:PDB   597->666 1o78A PDBj 1e-09 41.4 %
:RPS:PDB   11->455 1dv1A PDBj e-100 42.5 %
:RPS:PDB   598->666 2d5dA PDBj 7e-14 37.7 %
:RPS:SCOP  14->140 1pq4A  c.92.2.2 * 4e-26 10.2 %
:RPS:SCOP  123->359 1w93A3  d.142.1.2 * 7e-59 34.8 %
:RPS:SCOP  340->455 1bncA1  b.84.2.1 * 1e-39 32.5 %
:RPS:SCOP  600->672 1gjxA  b.84.1.1 * 2e-14 27.4 %
:HMM:SCOP  8->122 1w96A2 c.30.1.1 * 7.7e-49 60.0 %
:HMM:SCOP  92->356 1w96A3 d.142.1.2 * 1e-71 39.2 %
:HMM:SCOP  339->454 1w96A1 b.84.2.1 * 2.3e-41 49.6 %
:HMM:SCOP  584->667 1o78A_ b.84.1.1 * 2.5e-17 39.3 %
:RPS:PFM   12->119 PF00289 * CPSase_L_chain 5e-15 43.0 %
:RPS:PFM   129->331 PF02786 * CPSase_L_D2 2e-40 48.5 %
:RPS:PFM   344->451 PF02785 * Biotin_carb_C 7e-29 52.3 %
:RPS:PFM   607->664 PF00364 * Biotin_lipoyl 1e-06 41.4 %
:HMM:PFM   126->330 PF02786 * CPSase_L_D2 1.8e-76 43.9 205/211  
:HMM:PFM   11->119 PF00289 * CPSase_L_chain 1.3e-45 52.3 109/110  
:HMM:PFM   344->451 PF02785 * Biotin_carb_C 1.8e-40 47.7 107/107  
:HMM:PFM   600->666 PF00364 * Biotin_lipoyl 2.6e-16 40.3 67/74  
:HMM:PFM   454->549 PF06236 * MelC1 0.00027 30.2 86/125  
:BLT:SWISS 1->654 MCCA_HUMAN e-148 46.0 %
:PROS 162->176|PS00866|CPSASE_1
:PROS 294->301|PS00867|CPSASE_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37588.1 GT:GENE ABE37588.1 GT:PRODUCT 3-methylcrotonoyl-CoA carboxylase, alpha subunit GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(412315..414354) GB:FROM 412315 GB:TO 414354 GB:DIRECTION - GB:PRODUCT 3-methylcrotonoyl-CoA carboxylase, alpha subunit GB:PROTEIN_ID ABE37588.1 GB:DB_XREF GI:91681286 InterPro:IPR000089 InterPro:IPR003135 InterPro:IPR005479 InterPro:IPR005481 InterPro:IPR005482 InterPro:IPR011761 InterPro:IPR011764 LENGTH 679 SQ:AASEQ MMATTALYRRFRTLLIANRGEIACRVIRTARAMGLRTVAVYSEADADALHVSEADEAVLLGPARARDSYLSIERIIAAAKQTGAEAVHPGYGFLSESAEFAQACADAGLIFVGPTPQMITAMGSKSGSKALMEKAGVPLVPGYHGEAQDDATLAAAADKIGFPVLVKASAGGGGRGMRVVRAANELGEAIVSAKREAKAAFGDDRLLIEKYVDNPRHIEVQIVGDSHGNLVSLFERECTLQRRHQKVIEEAPSPTLDAAQRETVCEAARRAAGAVNYVGAGTIEFVSDGKDVFFIEMNTRLQVEHPVTELISGVDLVEWQLRVAFGEALPLRQDQLTLNGHAIEARVYAENPAKNFMPSVGRISTWRTPAETDGLRIDAGYRAGDSVSPYYDAMLAKVIAFAPTRAAAIDRLNRGLEETDVRGVVTNIPFLSALVTHPEVRANAIDTGFIERHLAALTAAPAPVSDLELATAVAAILRAETDAARAEAPTPWRSSGWMPVGRRKRGFVFRHGRGHDHTDYKVQLAYGTGLATLTIDGRDLAFASLANGDGLDVLLDGARSRVNAVVEGHELYLRTRNGRFELHWVDPFGGESEESVGEDKIVAPLPGTVVALLAEQGAKLEKGAAILTLEVMKMEQTLRAPFAGTLKAIKCKVGDIVQEGVELAEIESAQDATEAQCPS GT:EXON 1|1-679:0| BL:SWS:NREP 1 BL:SWS:REP 1->654|MCCA_HUMAN|e-148|46.0|642/725| PROS 162->176|PS00866|CPSASE_1|PDOC00676| PROS 294->301|PS00867|CPSASE_2|PDOC00676| SEG 147->158|aqddatlaaaad| SEG 170->183|aggggrgmrvvraa| BL:PDB:NREP 2 BL:PDB:REP 12->453|2vpqB|e-112|50.8|441/448| BL:PDB:REP 597->666|1o78A|1e-09|41.4|70/84| RP:PDB:NREP 2 RP:PDB:REP 11->455|1dv1A|e-100|42.5|431/433| RP:PDB:REP 598->666|2d5dA|7e-14|37.7|69/70| RP:PFM:NREP 4 RP:PFM:REP 12->119|PF00289|5e-15|43.0|100/102|CPSase_L_chain| RP:PFM:REP 129->331|PF02786|2e-40|48.5|200/207|CPSase_L_D2| RP:PFM:REP 344->451|PF02785|7e-29|52.3|107/107|Biotin_carb_C| RP:PFM:REP 607->664|PF00364|1e-06|41.4|58/74|Biotin_lipoyl| HM:PFM:NREP 5 HM:PFM:REP 126->330|PF02786|1.8e-76|43.9|205/211|CPSase_L_D2| HM:PFM:REP 11->119|PF00289|1.3e-45|52.3|109/110|CPSase_L_chain| HM:PFM:REP 344->451|PF02785|1.8e-40|47.7|107/107|Biotin_carb_C| HM:PFM:REP 600->666|PF00364|2.6e-16|40.3|67/74|Biotin_lipoyl| HM:PFM:REP 454->549|PF06236|0.00027|30.2|86/125|MelC1| GO:PFM:NREP 6 GO:PFM GO:0003824|"GO:catalytic activity"|PF00289|IPR005481| GO:PFM GO:0008152|"GO:metabolic process"|PF00289|IPR005481| GO:PFM GO:0003824|"GO:catalytic activity"|PF02786|IPR005479| GO:PFM GO:0005524|"GO:ATP binding"|PF02786|IPR005479| GO:PFM GO:0008152|"GO:metabolic process"|PF02786|IPR005479| GO:PFM GO:0016874|"GO:ligase activity"|PF02785|IPR005482| RP:SCP:NREP 4 RP:SCP:REP 14->140|1pq4A|4e-26|10.2|127/255|c.92.2.2| RP:SCP:REP 123->359|1w93A3|7e-59|34.8|233/267|d.142.1.2| RP:SCP:REP 340->455|1bncA1|1e-39|32.5|114/116|b.84.2.1| RP:SCP:REP 600->672|1gjxA|2e-14|27.4|73/81|b.84.1.1| HM:SCP:REP 8->122|1w96A2|7.7e-49|60.0|115/0|c.30.1.1|1/1|PreATP-grasp domain| HM:SCP:REP 92->356|1w96A3|1e-71|39.2|250/0|d.142.1.2|1/1|Glutathione synthetase ATP-binding domain-like| HM:SCP:REP 339->454|1w96A1|2.3e-41|49.6|115/0|b.84.2.1|1/1|Rudiment single hybrid motif| HM:SCP:REP 584->667|1o78A_|2.5e-17|39.3|84/0|b.84.1.1|1/1|Single hybrid motif| OP:NHOMO 3150 OP:NHOMOORG 1077 OP:PATTERN --1-1211111111111------121111-12111111111111111111111--1--2-------11 2352A32422232255544-451156444444566656BB16543221233263544322444156845341222111-2225332322222-1--1--11113221222111111111111111111221111314336511132111211111111111111112111111111111111111211111233333333333333333333333333333432222222242333333333333333333332-112212-1-3311221221212221111-111111111111111111111112111111111111111-112322222222222222211112--1211211111221121------1222755511111356453316575644444444445-33333432455186686567684444434445444445632333333422224451111111111--111111111111111111353313653433344333333333344441344569862244333434745569113222342111111122253423-21332222222123224332244445512221232222221211111111311-112232322232132222222222242222331-11133------12341121111111111-111111111111111111112133322111111111111111121111111111111111111111112222223333144221111111111111115555532323336666365683333365511111111121111111111211122322222221111112-222211--------1-1-----------------------------------12- 1111334-732-5564466766576775544444446545555666553655854454344453333333436335525533444423-57544344553435988-5648465BA845555538A5C5PxB-C8D44445457544534A5375743A6DP4A444F548C7D54353b3336561385466764457 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 679 STR:RPRED 100.0 SQ:SECSTR HHGGcTTcccccEEEEcccHHHHHHHHHHHHHHTcEEEEEEEGGGTTcHHHHHccEEEEEEcccGGGTTTcHHHHHHHHHHHTccEEEccccTTTTcHHHHHHHHHTTcEEccccHHHHHHHHcHHHHHHHHHHTTccccccccccccccHHHHHHHHHHcccEEEEEccccccccEEEEccHHHHHHHHHHHHHHHHHHHccccEEEEEcccccEEEEEEEEEEccccEEEEEEEEEEEEETTEEEEEEEccTTccHHHHHHHHHHHHHHHHHHTcEEEEEEEEEEETTEEEEEEEEccccTTHHHHHHHHcccHHHHHHHHHTTccccccGGGcccccEEEEEEEEcccTTGTcccccEEcccEEcccccTTEEEEccccTTcEEccccccEEEEEEEEEccHHHHHHHHHHHHHHcEEccccccHHHHHHHHHcHHHHHccccTTHHHHHHTGGcccccccHHHHHHHHHHHHHHHccTTccccccccccccccccccHHHHHTcccHHHHHHHHHHHHHHHTccHHHEEEEEcTTccEEEEEEEEEEEEcTTcEEEEEEccTTcEEEEEEEETTEEEEEEEEccccccccTTcTTEEEccccEEEEEEcccTTcEEcTTcEEEEEEccccEEEEEccccEEccEEcccTTcEEcTTcEEEEccccccccccTcGG DISOP:02AL 1-8,586-602,668-680| PSIPRED ccccccccccccEEEEEccHHHHHHHHHHHHHccccEEEEEcccccccHHHHHccEEEEccccccccccccHHHHHHHHHHccccEEEEccccccccccHHHHHHHcccEEEcccHHHHHHHccHHHHHHHHHHcccccccccccccccccHHHHHcccccccEEEEEccccccccEEEHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccEEEEEEEEEEccccEEEEEEEEcccccccccEEEEcccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccEEEEEEcccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccEEEEEEEEEEccccccccccccEEEEEEcccccccEEEEEEEccccEEcccccccEEEEEEEcccHHHHHHHHHHHHHHEEEEEEcccHHHHHHHHccHHHHcccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEEEEEcccEEEEEEccEEEEEEEEEcccEEEEEEccEEEEEEEEEcccccEEEccccEEEEEEccccHHHHcccccccEEEcccccEEEEEEEccccEEccccEEEEEEEEccccEEEcccccEEEEEEcccccccccccEEEEEEcccccccccccc //