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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37593.1
DDBJ      :             short-chain dehydrogenase/reductase SDR
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  878/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:263 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->259 1iy8A PDBj 1e-49 43.1 %
:RPS:PDB   21->263 2ae1A PDBj 1e-45 28.2 %
:RPS:SCOP  24->260 1pwxA  c.2.1.2 * 1e-49 22.9 %
:HMM:SCOP  16->259 1zemA1 c.2.1.2 * 1.1e-81 42.6 %
:RPS:PFM   21->189 PF00106 * adh_short 6e-20 45.2 %
:HMM:PFM   22->187 PF00106 * adh_short 5e-37 28.6 161/167  
:BLT:SWISS 1->259 LVR_LEIAQ 2e-49 42.9 %
:PROS 157->185|PS00061|ADH_SHORT

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37593.1 GT:GENE ABE37593.1 GT:PRODUCT short-chain dehydrogenase/reductase SDR GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(419471..420262) GB:FROM 419471 GB:TO 420262 GB:DIRECTION - GB:PRODUCT short-chain dehydrogenase/reductase SDR GB:PROTEIN_ID ABE37593.1 GB:DB_XREF GI:91681291 InterPro:IPR002198 InterPro:IPR002347 InterPro:IPR002424 LENGTH 263 SQ:AASEQ MTLVSAATEQTRDCVTGGDARVVLVTGGASGIGRAAALAWARQGCSVLVADIDDRGGAETVEAIERLGSRARYQRNDVTDERECASLVEQAVLHFGRLDVAFNNAGITGPSAYIANYPGADWRHVINVNLLGIFNSMQPQLRLFESQGAGVIVNTASVIGLRGVAGGSAYAAAKHGVIGLTKCAALEYGRSGIRINAVCPGYIETPLVAAVPDRILTEKINRTGARRLGRPDEVAALVLWLASPAASYVNGAAVAVDGGFLAS GT:EXON 1|1-263:0| BL:SWS:NREP 1 BL:SWS:REP 1->259|LVR_LEIAQ|2e-49|42.9|252/267| PROS 157->185|PS00061|ADH_SHORT|PDOC00060| BL:PDB:NREP 1 BL:PDB:REP 21->259|1iy8A|1e-49|43.1|239/258| RP:PDB:NREP 1 RP:PDB:REP 21->263|2ae1A|1e-45|28.2|241/252| RP:PFM:NREP 1 RP:PFM:REP 21->189|PF00106|6e-20|45.2|168/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 22->187|PF00106|5e-37|28.6|161/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 24->260|1pwxA|1e-49|22.9|231/252|c.2.1.2| HM:SCP:REP 16->259|1zemA1|1.1e-81|42.6|244/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 19243 OP:NHOMOORG 1128 OP:PATTERN 22212447A8A8988619354121B66B7A7B22---------21154--622-24212232943135 KKc6x4-766F794x**UU-U*55y*UTUUUm****x***6*G*WLIA4HE3VINC6F11RQj5RNonobG111121212B9a11333779827331--A6V4EH*CeAN111111111111115877CG775B99JKKPN222KCIBHI8777633221753373HJDd8233143254215KE9AB661J9QGGGGGIGJHHIHHIHRIPPHQGHGBHINLKD888887Lh866666556666665CAACCA1C2AC26111CG55998687B9887767776634444444454444566666676777634422244485358C55544445478566268663311A8222B7113325333355523G2HsLLd22222QE*vr78DgTdbULNNMKLNLNNZ-MPbLHtIZh*m2*rrTumw*****agKUHRPcSKQUMJPAAAAAAAAVVVF8CFC22211222111222331221222121111BN**Q9LsgSl******XUUVQrr**ZXXYAX*f*h**p48XZROENMMZOjTzs7HD5B7ED6122111147DOM98T8F412211433327975G53849DEDRZ34432323332422522222225343599DC8DJHFBOH79AAAC8FEB999D8EAA8C1-2455B111111GKGI8N8FIIEFDDDFG-IGGGGCDFFFIDHEEFFEFTYTF9ABCC9ABBCCBCCBABABCYDDBDDBE31BCCCCCCBCCCB111955454FEFE3LNOL222828222222572NPOUQAM8FDPBWZWUOVZmSRQYSPVSU6454474443556H76776DD89ALNPNPMLCDEA7872365DD9899--------1-4----2---3-1------3-------34421656763D3 1112TFJ-944-7DH**uoxmzi****RRJPNNQRRMaQUNVVPNMhflyu***fleQRSPQGBL6986C55FCE342449BBCGD7C-c*O*NkLFHIFHEMQMG-JaF*YhTRSM98B7DTAdO7S7d*Q-MKZA8FBN9CTF9B8ACO58PDMIUhmsWEwcNRPLWhHafV7GE5*232GUOig*npLHFZHJIE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 263 STR:RPRED 100.0 SQ:SECSTR GGcccccccGGGGccTTcTTcEEEEETcccHHHHHHHHHHHTTTcEEEEEEccHHHHHHHHHHHHHTTccEEEEEccTTcHHHHHHHHHHHHHHTTTcccEEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHHHTTccEEEEEEccGGGTcccTTcHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEcccccccHHHHHHHHHHHHHHTccccccccHHHHHHHHHHHHcGGGTTccccEEEEcTTGGGc DISOP:02AL 1-17| PSIPRED cccccccccccHHHHHcccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccHHHHHccHHHHHHHHHcccccccccHHHHHHHHHHHHcHHHccccccEEEEccccccc //