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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37625.1
DDBJ      :             orotidine-5'-phosphate decarboxylase
Swiss-Prot:PYRF_RHOPS   RecName: Full=Orotidine 5'-phosphate decarboxylase;         EC=4.1.1.23;AltName: Full=OMP decarboxylase;         Short=OMPDCase;         Short=OMPdecase;

Homologs  Archaea  29/68 : Bacteria  613/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.1.2
:235 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->220 1eixC PDBj 9e-38 39.2 %
:RPS:PDB   11->221 1eixC PDBj 1e-63 41.2 %
:RPS:SCOP  10->221 1dbtA  c.1.2.3 * 7e-62 37.7 %
:HMM:SCOP  9->235 2ffcA1 c.1.2.3 * 4.3e-64 45.3 %
:RPS:PFM   12->220 PF00215 * OMPdecase 2e-19 38.2 %
:HMM:PFM   11->227 PF00215 * OMPdecase 1.7e-51 30.8 211/223  
:BLT:SWISS 1->221 PYRF_RHOPS e-122 100.0 %
:PROS 63->76|PS00156|OMPDECASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37625.1 GT:GENE ABE37625.1 GT:PRODUCT orotidine-5'-phosphate decarboxylase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(453455..454162) GB:FROM 453455 GB:TO 454162 GB:DIRECTION - GB:PRODUCT orotidine-5'-phosphate decarboxylase GB:PROTEIN_ID ABE37625.1 GB:DB_XREF GI:91681323 InterPro:IPR001754 LENGTH 235 SQ:AASEQ MAQADPADRDRLIVALDVPSVDAANAMIEKLGDSVGFYKIGYQLAYAGGLPLVEKLARAGKKVFVDLKLHDIGNTVARGVESLNSLGATFLTVHAYPQTMKAAVAARGDSGLKILAVTVLTSYDDSDLADAGYRFGVRDLVEARARQALAIGVDGLVCSPEEAANLRGIVGPDMALVTPGIRPAGAAAGDQKRIMTPARAIAAGASHLVVGRPVMEAADPKQAAEAIVAEIAQAT GT:EXON 1|1-235:0| SW:ID PYRF_RHOPS SW:DE RecName: Full=Orotidine 5'-phosphate decarboxylase; EC=4.1.1.23;AltName: Full=OMP decarboxylase; Short=OMPDCase; Short=OMPdecase; SW:GN Name=pyrF; OrderedLocusNames=RPD_0387; SW:KW Complete proteome; Decarboxylase; Lyase; Pyrimidine biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->221|PYRF_RHOPS|e-122|100.0|221/235| GO:SWS:NREP 3 GO:SWS GO:0016831|"GO:carboxy-lyase activity"|Decarboxylase| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| GO:SWS GO:0006221|"GO:pyrimidine nucleotide biosynthetic process"|Pyrimidine biosynthesis| PROS 63->76|PS00156|OMPDECASE|PDOC00141| SEG 222->234|qaaeaivaeiaqa| BL:PDB:NREP 1 BL:PDB:REP 12->220|1eixC|9e-38|39.2|209/232| RP:PDB:NREP 1 RP:PDB:REP 11->221|1eixC|1e-63|41.2|211/232| RP:PFM:NREP 1 RP:PFM:REP 12->220|PF00215|2e-19|38.2|207/223|OMPdecase| HM:PFM:NREP 1 HM:PFM:REP 11->227|PF00215|1.7e-51|30.8|211/223|OMPdecase| GO:PFM:NREP 2 GO:PFM GO:0004590|"GO:orotidine-5'-phosphate decarboxylase activity"|PF00215|IPR001754| GO:PFM GO:0006207|"GO:'de novo' pyrimidine base biosynthetic process"|PF00215|IPR001754| RP:SCP:NREP 1 RP:SCP:REP 10->221|1dbtA|7e-62|37.7|212/237|c.1.2.3| HM:SCP:REP 9->235|2ffcA1|4.3e-64|45.3|223/0|c.1.2.3|1/1|Ribulose-phoshate binding barrel| OP:NHOMO 646 OP:NHOMOORG 643 OP:PATTERN --1--1------------1--11---------1-11-111--11-111111111-1-111-111---- 1111--------------------------------1---1111-------------------1------1-------1111-11111------------------------------------------------111-------1111111111111111111111111111111111111-----111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111----------------1--------------11111111-111----11111-11111----111111111111111111111111-11111111111111111111111111--1111111111111111111111111111111111111---------------1111111111----------------------------------------------------1211111111111111---1111111111111111111111111111-1111111111111111111111111111111111111111111111111111111111111-1111111-11111111111111111111-11111111111111111111111111111111111111111111111111111111111111111--11111111111111111111-1111111--111111111111111111111111111111111111111111111111111111111111111111111111-----------------------------------1----------------11- ------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 215 STR:RPRED 91.5 SQ:SECSTR ######HcGGcEEEEEccccHHHHHHHHTTccTTTcEEEEcHHHHHHHHHHHHHHHHHTTccEEEEEEEcccHHHHHHHHHHHHHHTccEEEEEGGHHHHHHHHHHGGGGccEEEEEcccTTccHHHHGGGTccccHHHHHHHHHHHHHHTTccEEEccGGGHHHHHHHHccccEEEEcccccTTcccTTccccccHHHHHHHTccEEEEcHHHHTcccHH############## DISOP:02AL 1-6,235-236| PSIPRED cccccccccccEEEEEccccHHHHHHHHHHHccccEEEEEcHHHHHHccHHHHHHHHHccccEEEEEHHcccHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHccccEEEEEEEEccccHHHHHHccccccHHHHHHHHHHHHHHccccEEEccHHHHHHHHHHcccccEEEEcccccccccccccEEEccHHHHHHccccEEEEccHHHccccHHHHHHHHHHHHHHcc //