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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37678.1
DDBJ      :             two component transcriptional regulator, winged helix family
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  861/915 : Eukaryota  60/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:228 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->226 2oqrA PDBj 3e-33 39.5 %
:RPS:PDB   6->222 3c3wB PDBj 9e-29 21.7 %
:RPS:SCOP  6->125 1p2fA2  c.23.1.1 * 6e-29 33.6 %
:RPS:SCOP  130->228 1oddA  a.4.6.1 * 1e-19 29.6 %
:HMM:SCOP  2->193 1s8nA_ c.23.1.1 * 4.2e-35 26.5 %
:RPS:PFM   7->118 PF00072 * Response_reg 5e-18 40.5 %
:RPS:PFM   153->226 PF00486 * Trans_reg_C 6e-11 44.6 %
:HMM:PFM   7->117 PF00072 * Response_reg 1e-27 35.5 110/112  
:HMM:PFM   152->226 PF00486 * Trans_reg_C 1.7e-25 41.3 75/77  
:BLT:SWISS 4->226 WALR_STAHJ 7e-35 38.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37678.1 GT:GENE ABE37678.1 GT:PRODUCT two component transcriptional regulator, winged helix family GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 507883..508569 GB:FROM 507883 GB:TO 508569 GB:DIRECTION + GB:PRODUCT two component transcriptional regulator, winged helix family GB:PROTEIN_ID ABE37678.1 GB:DB_XREF GI:91681376 InterPro:IPR001789 InterPro:IPR001867 LENGTH 228 SQ:AASEQ MPNARKILIVDDDTDLREALVEQLSLHEEFEASAVDTGAKGVQSAKANSPDLVLMDVGLPDTDGREVVRSLRKGGFKAPIIMLTGHDTDSDTILGLESGANDYVAKPFRFAVLLARIRAQLRQHEASEDAVFTVGPYSFRPGSKMLTGANAKKVRLTEKETAILRFLYRASQSPVSRETLLQEVWGYNSGVTTHTLETHIYRLRQKIEKDAANPEILVTEAGGYKLVP GT:EXON 1|1-228:0| BL:SWS:NREP 1 BL:SWS:REP 4->226|WALR_STAHJ|7e-35|38.9|221/233| BL:PDB:NREP 1 BL:PDB:REP 4->226|2oqrA|3e-33|39.5|220/226| RP:PDB:NREP 1 RP:PDB:REP 6->222|3c3wB|9e-29|21.7|203/210| RP:PFM:NREP 2 RP:PFM:REP 7->118|PF00072|5e-18|40.5|111/111|Response_reg| RP:PFM:REP 153->226|PF00486|6e-11|44.6|74/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 7->117|PF00072|1e-27|35.5|110/112|Response_reg| HM:PFM:REP 152->226|PF00486|1.7e-25|41.3|75/77|Trans_reg_C| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 6->125|1p2fA2|6e-29|33.6|116/120|c.23.1.1| RP:SCP:REP 130->228|1oddA|1e-19|29.6|98/100|a.4.6.1| HM:SCP:REP 2->193|1s8nA_|4.2e-35|26.5|189/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 12532 OP:NHOMOORG 943 OP:PATTERN -----------------------4-----1----11--222213--1B-7311-1-1111-------1 8RR6U566778445BAA99-9F449B999997HEFFAGGECGCFBA887888CDH45711KKN6S8JTTR8333354458IA924488JJZS-G22---44J7B9TASAP-------1--11112423225472B5QPQWUH8De5nRfbMLEKICD6669A8OOCKlr*K684555675545CE566342D9MYYZYZVZaJaYbZXXKMHFDGZbgCEEWCFHCBBCBCjf7AA9A99899AAA9968996C675DD654446677DD655675686DED8668AAA78877887877555556666765597766576776ZLPeRRRWUVXTTMIfXX9DFATLI8AGJOB6ieREC6689587A8427MHBHGGF66666JEVRUHDGKQJOOAA9AAAAA99D-JNKJMKKPBNG1SNNMOLMVUPKGKOBECEBGGBFFEFDDDDDDDDDCCCA9QGE3333333322222333223223223212247DG67CIHDJTUWVbTRJJJFSSYdLJLKDKbTXSURc13NUSTEJFDbKMMP5ISMID9GM82322212B87KUgIffPA7TD8POBAK1cPaYQSXGHNLTOXdFON77A6676776232223322DJ9BJ66NMAKJMTAKJDPGNMKGKKPOOJRMLNLSW--58E5C------GFEFEGAHHGIHIIJGH-HJIGHIHGHIHHHHHHHHEKHJEG879FDFEFEFFDEEDEDEEIFEFEEFH81FHHHHHGHGHHH--2F343336877AGdCN555424255553236CBABD8C89DHKaXaaSeecNWZZVKTRX3212132126IKKOJJJJJLNRPQQQHEJEFGGH66562-Y2BB5566211-11-1312-------------------------38444565454Q3 ----12--------31111-1111-----------------------122111211111212-11---11--1-1------111111-----1-1-111--1-313-1--------------------------------------------------1----2-1-------4-124-------4--D1-2--B---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 228 STR:RPRED 100.0 SQ:SECSTR cEEcEEEEEEcccHHHHHHHHHHHHTcTEEEEEEEccHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHHHHHHHHHHccTTTTccHHHHHHHHHHTTTccccEEHTTccHHHHHHHHTccHHHHHHHHHHHHHHTTccccccHHHHHHHHHHTTTc DISOP:02AL 1-3,126-130| PSIPRED cccccEEEEEEccHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHccccccEEEEEccccHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHcccccccccEEEccEEEEcccEEEEEcccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHccccccccccEEHHHHHHHHHHccccccccEEEEEEEEEEEEcc //