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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37714.1
DDBJ      :             OmpA/MotB
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  69/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.79.7
:697 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   567->679 2k1sA PDBj 3e-08 36.8 %
:RPS:PDB   567->677 3cypB PDBj 5e-15 23.4 %
:RPS:SCOP  567->672 1oapA  d.79.7.1 * 3e-15 33.7 %
:HMM:SCOP  564->674 1oapA_ d.79.7.1 * 1e-19 37.7 %
:RPS:PFM   571->668 PF00691 * OmpA 1e-05 37.6 %
:HMM:PFM   570->668 PF00691 * OmpA 1.2e-16 31.2 93/97  
:BLT:SWISS 569->673 PORF_PSESY 5e-09 32.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37714.1 GT:GENE ABE37714.1 GT:PRODUCT OmpA/MotB GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(548928..551021) GB:FROM 548928 GB:TO 551021 GB:DIRECTION - GB:PRODUCT OmpA/MotB GB:PROTEIN_ID ABE37714.1 GB:DB_XREF GI:91681412 InterPro:IPR006665 LENGTH 697 SQ:AASEQ MRRLRLALLATTAITLWQAASLPARADTALMLMAQAAPAPDKGDEKDRKGPPPGERKGPPPGAAPSQAPPPAAAPQPRPAPPPAAAPAPRAEPPAAPRAEPPPRPAPPPAPRAEPPAAPRAAPPPPPPAAAPPRPPAPPAEKSAPRVEPPAPPRAAPPPPPPAAAPPKPSAPPAADKGAAPPPAATPPRPSVPPAADKGAAPTPPPAAAPQRQPAPADRLAPADKGGAPSQRPTPPAAGQIGAPPAAGSPPPAAQTPPPAAGQTSAPTTPPPAGQPPAAQTGAPAQPPAGQPPAAQKDVTPPAAGQIGTPTPAAPTPATPTQPPAGQTTAPVPGTIGPQGAQPGAAGALPPGAPVARTPPPTVTAPIPAAPPPAQALTPIAPGAAPQGPRNITDFRSERREVQQGGRTVITEPGRIIVRDPNGQEFIRHNEMDRFRYGARNIRTEKIRGGDTRTIVLRPDGSEIINVTGGDGQLLRRIRRDRQGREIIIIDNSFGPRDRANFYVDLPPPVLRMPRDRYIVDYEDASPELIYETLDAPPVERIQRRYSMDEIRYSPSVRQRMPSIDLNTITFELGSWDISPDQASKLQAIADGLNRSISRNPREVFLIEGHTDATGNDTDNLSLSDRRAESAAALLTQQFAVPAENLTSQGYGEQYLKVQSDGPERQNRRVTVRRITPLLNGGQASLPPPPPGTAPRR GT:EXON 1|1-697:0| BL:SWS:NREP 1 BL:SWS:REP 569->673|PORF_PSESY|5e-09|32.3|99/344| SEG 2->16|rrlrlallattaitl| SEG 29->40|almlmaqaapap| SEG 48->223|rkgpppgerkgpppgaapsqapppaaapqprpapppaaapapraeppaapraeppprpapppapraeppaapraappppppaaapprppappaeksaprveppappraappppppaaappkpsappaadkgaapppaatpprpsvppaadkgaaptpppaaapqrqpapadrlapa| SEG 233->296|ptppaagqigappaagspppaaqtpppaagqtsapttpppagqppaaqtgapaqppagqppaaq| SEG 300->382|tppaagqigtptpaaptpatptqppagqttapvpgtigpqgaqpgaagalppgapvartppptvtapipaapppaqaltpiap| SEG 469->490|ggdgqllrrirrdrqgreiiii| SEG 687->691|ppppp| BL:PDB:NREP 1 BL:PDB:REP 567->679|2k1sA|3e-08|36.8|106/149| RP:PDB:NREP 1 RP:PDB:REP 567->677|3cypB|5e-15|23.4|107/129| RP:PFM:NREP 1 RP:PFM:REP 571->668|PF00691|1e-05|37.6|93/97|OmpA| HM:PFM:NREP 1 HM:PFM:REP 570->668|PF00691|1.2e-16|31.2|93/97|OmpA| GO:PFM:NREP 1 GO:PFM GO:0009279|"GO:cell outer membrane"|PF00691|IPR006665| RP:SCP:NREP 1 RP:SCP:REP 567->672|1oapA|3e-15|33.7|101/108|d.79.7.1| HM:SCP:REP 564->674|1oapA_|1e-19|37.7|106/108|d.79.7.1|1/1|OmpA-like| OP:NHOMO 91 OP:NHOMOORG 69 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------1--32------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------33312121332----------1-1131141111--1111111111111----1-21111-1------------------------------------------------------------------------------------------1-1------------------------------------1--------11-1-1-1-----------------------------------------1--------------------------1---------------------------------------------------------------------------------------------------------------------------------------1--11111----111-------------------------------------------------1111------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 177 STR:RPRED 25.4 SQ:SECSTR ######################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################################cccccccccTTEEEcccTTccTTcEEEEcccTTEEEEEEEEEEEccTccTcccEEccEEEEEEEcEEcccTTcccccHHHHHHHHHHHHHHTTcEHccTTcEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHTTccGGGEEEEEcTTccccccTTcHHHHHcEEEEEEEcccc################## DISOP:02AL 1-2,37-240,242-298,319-326,390-403,535-555,682-698| PSIPRED cccEEEEEEcccHHHHHHccccccccccEEEEEccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccEEEEcccEEEEEccccEEEEEcccccccccccccEEEEEcccccEEEEEEccccEEEEEEEcccHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccccccccHHcccHHHHHHHHHHccccHHcccccHHHHcccccHHHcccEEEEccEEccccHHHccHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHEEEEEccccccccccccccccccEEEEEEEEccccccccccccccccccccc //