[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37736.1
DDBJ      :             3-isopropylmalate dehydratase, small subunit
Swiss-Prot:LEUD_RHOPS   RecName: Full=3-isopropylmalate dehydratase small subunit;         EC=4.2.1.33;AltName: Full=Isopropylmalate isomerase;AltName: Full=Alpha-IPM isomerase;         Short=IPMI;

Homologs  Archaea  37/68 : Bacteria  702/915 : Eukaryota  106/199 : Viruses  0/175   --->[See Alignment]
c.8.2
:201 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->175 2hcuA PDBj 3e-43 52.0 %
:RPS:PDB   1->177 1c96A PDBj 5e-48 19.9 %
:RPS:SCOP  1->168 1l5jA2  c.8.2.1 * 1e-39 20.1 %
:HMM:SCOP  1->196 1acoA1 c.8.2.1 * 1.3e-58 44.2 %
:RPS:PFM   3->119 PF00694 * Aconitase_C 6e-15 41.0 %
:HMM:PFM   1->123 PF00694 * Aconitase_C 3.1e-47 50.4 123/131  
:HMM:PFM   131->175 PF04985 * Phage_tube 0.00043 17.8 45/167  
:BLT:SWISS 1->201 LEUD_RHOPS e-117 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37736.1 GT:GENE ABE37736.1 GT:PRODUCT 3-isopropylmalate dehydratase, small subunit GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(573397..574002) GB:FROM 573397 GB:TO 574002 GB:DIRECTION - GB:PRODUCT 3-isopropylmalate dehydratase, small subunit GB:PROTEIN_ID ABE37736.1 GB:DB_XREF GI:91681434 InterPro:IPR000573 InterPro:IPR004431 LENGTH 201 SQ:AASEQ MDKFTTLEGVAAPLKIINVDTDMIIPKQYLKTIKRTGLGKGLFSEQRYNDDGSENPDFILNKPAYRNAKILVAGDNFGCGSSREHAPWALLDFGIRCVISTSFGDIFYNNCFKNGVLPIRVSQADLDKLFDDAERGSNATVTIDLPAQEIRGPDGGTVKFEIDPFRKHCLINGLDDIGLTLEKKASIDSYEDKAKTERAWA GT:EXON 1|1-201:0| SW:ID LEUD_RHOPS SW:DE RecName: Full=3-isopropylmalate dehydratase small subunit; EC=4.2.1.33;AltName: Full=Isopropylmalate isomerase;AltName: Full=Alpha-IPM isomerase; Short=IPMI; SW:GN Name=leuD; OrderedLocusNames=RPD_0498; SW:KW Amino-acid biosynthesis; Branched-chain amino acid biosynthesis;Complete proteome; Leucine biosynthesis; Lyase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->201|LEUD_RHOPS|e-117|100.0|201/201| GO:SWS:NREP 4 GO:SWS GO:0008652|"GO:cellular amino acid biosynthetic process"|Amino-acid biosynthesis| GO:SWS GO:0009082|"GO:branched chain family amino acid biosynthetic process"|Branched-chain amino acid biosynthesis| GO:SWS GO:0009098|"GO:leucine biosynthetic process"|Leucine biosynthesis| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| BL:PDB:NREP 1 BL:PDB:REP 1->175|2hcuA|3e-43|52.0|171/177| RP:PDB:NREP 1 RP:PDB:REP 1->177|1c96A|5e-48|19.9|166/753| RP:PFM:NREP 1 RP:PFM:REP 3->119|PF00694|6e-15|41.0|117/130|Aconitase_C| HM:PFM:NREP 2 HM:PFM:REP 1->123|PF00694|3.1e-47|50.4|123/131|Aconitase_C| HM:PFM:REP 131->175|PF04985|0.00043|17.8|45/167|Phage_tube| GO:PFM:NREP 1 GO:PFM GO:0008152|"GO:metabolic process"|PF00694|IPR000573| RP:SCP:NREP 1 RP:SCP:REP 1->168|1l5jA2|1e-39|20.1|154/212|c.8.2.1| HM:SCP:REP 1->196|1acoA1|1.3e-58|44.2|190/0|c.8.2.1|1/1|LeuD/IlvD-like| OP:NHOMO 1000 OP:NHOMOORG 845 OP:PATTERN ---1-----------1-------21--11132222222222222221121332211-----1--1-22 1111111111111111111-111111111111111111221111111--111111111--111-11111111111111-11-211111111111---11--1-1111111---------------11111111111222321112111111111111111111111111111111111111111111122-11111111111111111111111111111111--11111111-1111111111111111111-------1------------1111-1-------11111111111111-------------111111111-12-11-------1-12111----1-1--12112--1221112-1111--1-112111-----212221111111111111111111-11211311111-1112111111112143122111111121111111111111111-----------------------------111311143231112111111111211111-1214324311221111111111122211111211111111111111-1211111111221-1111111121111-112-111111111--1--------1-11111111111-2111111111111111111111-1-1111-11--111112111111111111-11-1111111111111111111111112121212222212112111111111-11111111111111-1---------11111111112-11111111111111111121111111221112111111-1-11-1-111111111111111111111111111111111221111--------------------------------------2--1-111111 --------------11321122212111111111222111-111111-12111111321111121111-11211211-1111111121-11131111111111112--1-------------------------------------------------------------------111911-1-2---1311111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 193 STR:RPRED 96.0 SQ:SECSTR HHHcccGGGGGGTccHHHHGGGcTTTcccTTTcccccEEcTTTccEEcHccEEcHHHHHHHHHHHTccEEEEcccccTcccccTHHHHHHHHTTEEEEEEccccHHHHHHHHHTTcEEEEEccGGGGGGccTTcccTccEEEEEcGGGccTTTTccEEEHHHHHHHHTcHHHHHHHHHHHHHHHTcHHHHHHH######## DISOP:02AL 1-1,195-198,201-202| PSIPRED ccccEEEEEEEEEEEcccccHHHcccHHHHccccHHHHHccccHHHHcccccccccHHHHcccccccccEEEEcccccccccHHHHHHHHHHcccEEEEEccHHHHHHHHHHHccccEEEEcHHHHHHHHHHHHcccccEEEEEccccEEEEccccEEEEcccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcHHHcccc //