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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37793.1
DDBJ      :             rare lipoprotein A
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  499/915 : Eukaryota  2/199 : Viruses  1/175   --->[See Alignment]
b.52.1
:159 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   72->145 2bh0A PDBj 1e-12 24.3 %
:RPS:SCOP  59->159 1n10A2  b.52.1.3 * 3e-14 20.2 %
:HMM:SCOP  51->159 1bw3A_ b.52.1.2 * 2.4e-10 25.5 %
:RPS:PFM   71->151 PF03330 * DPBB_1 3e-06 43.8 %
:HMM:PFM   71->154 PF03330 * DPBB_1 6.4e-22 40.5 74/78  
:BLT:SWISS 72->159 RLPA_SYNY3 1e-26 62.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37793.1 GT:GENE ABE37793.1 GT:PRODUCT rare lipoprotein A GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(628269..628748) GB:FROM 628269 GB:TO 628748 GB:DIRECTION - GB:PRODUCT rare lipoprotein A GB:PROTEIN_ID ABE37793.1 GB:DB_XREF GI:91681491 InterPro:IPR005132 InterPro:IPR012997 LENGTH 159 SQ:AASEQ MTDTKKSPPGLVTRPRTAFALIAATVLMSGAAATEASARSKRHHHHAHHNNAQNDWRDANAALGSGGRSFSGVASYYGNESGNRTASGQRMNANAMTAAHRSLPFGTKLRVTHGGRSVVVTVNDRGPFIRGRVLDLSTGAARAIGLTSRGVGRVVAEVM GT:EXON 1|1-159:0| BL:SWS:NREP 1 BL:SWS:REP 72->159|RLPA_SYNY3|1e-26|62.5|88/321| SEG 43->52|hhhhahhnna| RP:PDB:NREP 1 RP:PDB:REP 72->145|2bh0A|1e-12|24.3|74/200| RP:PFM:NREP 1 RP:PFM:REP 71->151|PF03330|3e-06|43.8|73/80|DPBB_1| HM:PFM:NREP 1 HM:PFM:REP 71->154|PF03330|6.4e-22|40.5|74/78|DPBB_1| RP:SCP:NREP 1 RP:SCP:REP 59->159|1n10A2|3e-14|20.2|99/133|b.52.1.3| HM:SCP:REP 51->159|1bw3A_|2.4e-10|25.5|106/125|b.52.1.2|1/1|Barwin-like endoglucanases| OP:NHOMO 661 OP:NHOMOORG 502 OP:PATTERN -------------------------------------------------------------------- 221---------------------------------------------------------11-3------1-----------321--------1-----1121--11111---------------22232223212----------1211111111122211121111111-1-----1----11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------1-1-1111-1111234442222322222222222222-32443323221122222222222222111----------111111111111112211--------1111111111111111111-1-131111111111111111111331111111111112--11112111121-2-11-111111111111111-211-1211112212222-111-11112111111-1111111111111111111111111122222111121221222212122221111211--11111------11111111111111111-1121111111111111111---1111-11111111111-1-1111111111--111111111111---1111112222211221111111111-111111111112222122222222222222222----------1111111112111111111111111111--1-1111111111111111------------------------------------1-1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------2---------- -----1------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 88 STR:RPRED 55.3 SQ:SECSTR #######################################################################EEEEEccccccccTTccccccTTcEEEEcHHHHcGGGcTTTTTTEEEEEEEEEEcTTccTTcEEEcHHHHHHHccGGGccEEEEEEEE DISOP:02AL 1-6,8-9,28-45| PSIPRED cccccccccccccccHHHHHHHHHHHHcccccccccEEEEcccccccccccccccccEEEEcccccccEEEEEEEEEcccccccccccccccccHHHHHccccccccEEEEEEcccEEEEEEcccccccccEEEEccHHHHHHHccccccEEEEEEEEc //