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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37803.1
DDBJ      :             protein of unknown function DUF610, YibQ
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  124/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.6.2
:411 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   157->399 2qv5A PDBj 7e-44 39.1 %
:RPS:SCOP  186->402 2nlyA1  c.6.2.7 * 2e-42 24.0 %
:HMM:SCOP  186->405 2nlyA1 c.6.2.7 * 4.4e-59 41.6 %
:RPS:PFM   191->402 PF04748 * Polysacc_deac_2 2e-28 35.9 %
:HMM:PFM   191->403 PF04748 * Polysacc_deac_2 3.7e-66 40.5 210/213  
:BLT:SWISS 189->381 YIBQ_ECOLI 8e-08 20.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37803.1 GT:GENE ABE37803.1 GT:PRODUCT protein of unknown function DUF610, YibQ GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(638389..639624) GB:FROM 638389 GB:TO 639624 GB:DIRECTION - GB:PRODUCT protein of unknown function DUF610, YibQ GB:PROTEIN_ID ABE37803.1 GB:DB_XREF GI:91681501 InterPro:IPR006837 LENGTH 411 SQ:AASEQ MSVSADELSTPLGQKRGRLRRFRLPFTITQAIATLLGVFLLGFLGFALFNNDPLGGEPTVQVMIKPPAPDEKKEAAAPADKSSAAKAAKSEFAEAKDGKDAVQPGQKTITIIDGSKGTRQDVVVSSGSGDDKVDAPPAEPAMANGINPKLLEQSRYGMIPVAAGALKPVSAYAMTTDADRAKAEKMPTIAIVVTGLGVGAARTNDAVIKLPRAVTLAFTPYGSDPGKLVEQARAKQHEVLLQIPMEPFDYPDNDPGPQTLLTSGAPEQNLDRLTWHLSRIQGYVGLSNFMGARFVATDAAMQPIIREAAKRGLGYLDDGSAPRSVAPSLAKSLAMPFARADSAIDAVPTAAEIDKALARLEALAKERGSAVGTASALPVSIERIVSWSKSLESRGILLVPLTMAMLKSKST GT:EXON 1|1-411:0| BL:SWS:NREP 1 BL:SWS:REP 189->381|YIBQ_ECOLI|8e-08|20.6|189/319| SEG 35->49|llgvfllgflgfalf| SEG 65->97|kppapdekkeaaapadkssaakaaksefaeakd| SEG 121->134|dvvvssgsgddkvd| SEG 355->367|kalarlealaker| BL:PDB:NREP 1 BL:PDB:REP 157->399|2qv5A|7e-44|39.1|238/246| RP:PFM:NREP 1 RP:PFM:REP 191->402|PF04748|2e-28|35.9|209/213|Polysacc_deac_2| HM:PFM:NREP 1 HM:PFM:REP 191->403|PF04748|3.7e-66|40.5|210/213|Polysacc_deac_2| RP:SCP:NREP 1 RP:SCP:REP 186->402|2nlyA1|2e-42|24.0|208/216|c.6.2.7| HM:SCP:REP 186->405|2nlyA1|4.4e-59|41.6|219/0|c.6.2.7|1/1|Glycoside hydrolase/deacetylase| OP:NHOMO 127 OP:NHOMOORG 124 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111111111111-1----111-------------11-----------------------------------------------------------------------------------------------------------------------------11----------------1111-------11111111111----------1-111111111111111111111111--112----------111111111--1-212-----------------------------------------------------------------------------------------------------------111-1-1-11111111111111-------11--------------------------------11---------1--11111---11--------------------------------------------------------1------------------------------------------------------1--11-1------------------------1111------1---111----------------------------------------1-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 238 STR:RPRED 57.9 SQ:SECSTR ############################################################################################################################################################ccccccTTcccHHHHTcccccccccEE#####EEEEEEEETccHHHHHHHHHHccTTcEEEEETTcccHHHHHHHHHHHTccEEEEEEEccTTTTTccccTTcccTTccHHHHHHHHHHHHTTcccccEEEEEEcTTGGGcHHHHHHHHHHHHHTTcEEEEccccTTccHHHHHHHHTccEEEccEETTccccHHHHHHHHHHHHHHHHHHcEEEEEEEccHHHHHHHHHHHHHGGGGTEEEc############ DISOP:02AL 1-5,67-103,131-133,135-150,179-180,182-182,408-412| PSIPRED ccccHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccccccHHHHHcccccHHHHHHHHHHHHHHHccccccccccccEEEEEEccccccEEEEEEccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccEEEEEEcccccccHHHHHHHHHcccccEEEEccccccHHHHHHHHHHcccEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHHHHHcccEEEEcccccccHHHHHHHHHcccEEEEEEEEcccccHHHHHHHHHHHHHHHHHccEEEEEEcccHHHHHHHHHHccccccccEEEEEHHHHHHccccc //