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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37856.1
DDBJ      :             cytochrome c, class I
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  203/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.3.1
:212 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   40->212 1m6zA PDBj 2e-19 34.7 %
:RPS:PDB   21->212 3cx5D PDBj 2e-17 11.2 %
:RPS:SCOP  46->117 1fcdC1  a.3.1.4 * 7e-17 23.6 %
:RPS:SCOP  91->212 1mg2D  a.3.1.1 * 5e-14 17.1 %
:HMM:SCOP  37->118 1h1oA2 a.3.1.4 * 7.8e-21 45.7 %
:HMM:SCOP  118->213 1etpA2 a.3.1.4 * 1.2e-17 36.8 %
:HMM:PFM   51->118 PF00034 * Cytochrom_C 2.1e-08 26.5 68/91  
:HMM:PFM   134->211 PF00034 * Cytochrom_C 1e-12 27.3 77/91  
:BLT:SWISS 17->212 CYC4_PSEST 1e-20 35.3 %
:REPEAT 2|39->118|135->212

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37856.1 GT:GENE ABE37856.1 GT:PRODUCT cytochrome c, class I GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(700581..701219) GB:FROM 700581 GB:TO 701219 GB:DIRECTION - GB:PRODUCT cytochrome c, class I GB:PROTEIN_ID ABE37856.1 GB:DB_XREF GI:91681554 InterPro:IPR003088 InterPro:IPR008169 InterPro:IPR009056 LENGTH 212 SQ:AASEQ MSRLSIGPSTNKKRLTMNRCAAALILVALGTAGASTALRAADLEAGRAKAELCTGCHGENGVSGMEYTPSLAGQPDLFIQWQLIFFRSGTRQNASMRPFVDDLSNEDIRNLGAYYASLPPMTNRKPDDDPDLSRKGAQAAAGRRCASCHTDNYAGIKATARLAGQREEYLIKALNEFKSGQRSGGAMAAMADVAYPLSEEEIYALAHYLAHL GT:EXON 1|1-212:0| BL:SWS:NREP 1 BL:SWS:REP 17->212|CYC4_PSEST|1e-20|35.3|190/210| NREPEAT 1 REPEAT 2|39->118|135->212| BL:PDB:NREP 1 BL:PDB:REP 40->212|1m6zA|2e-19|34.7|170/190| RP:PDB:NREP 1 RP:PDB:REP 21->212|3cx5D|2e-17|11.2|179/248| HM:PFM:NREP 2 HM:PFM:REP 51->118|PF00034|2.1e-08|26.5|68/91|Cytochrom_C| HM:PFM:REP 134->211|PF00034|1e-12|27.3|77/91|Cytochrom_C| RP:SCP:NREP 2 RP:SCP:REP 46->117|1fcdC1|7e-17|23.6|72/80|a.3.1.4| RP:SCP:REP 91->212|1mg2D|5e-14|17.1|117/147|a.3.1.1| HM:SCP:REP 37->118|1h1oA2|7.8e-21|45.7|81/0|a.3.1.4|1/2|Cytochrome c| HM:SCP:REP 118->213|1etpA2|1.2e-17|36.8|95/98|a.3.1.4|2/2|Cytochrome c| OP:NHOMO 385 OP:NHOMOORG 203 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------36112-1-1-1-------------21--1-22-------2-111-11-----2--11111-1--------1----2----------------------------------1--12213144442122225544333335635-33213312423444634322334-11111111111313225---------------------------------------------------------3321-131212122222222122223212221---3212------------1----------------------------------------------------------------111111111111---1-----1111412------------------------1111-32232231111123------------1111111111131221111111111----111-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 192 STR:RPRED 90.6 SQ:SECSTR ####################cccccccccTTccTTccccHHHHHHHHHHHHTGGGTcccTTccGGGGcTTTccHHHHHHHHTTcEEEccccTTccccEEEccTTcccccccccHHHHTTTTccccccccTTTccTTHHHHHHHHHHcccccccTTccTcTTcEEcccccccTTccccTTccccHHHHHTTTccccccHHHHHHHHHHHHHHH DISOP:02AL 1-4,6-8,155-155| PSIPRED cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHcccccccccHHHHHHccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccHHHHHHHcccccccccccccccccHHHHHHHHHHHHccccccccccccHHHHHHccHHHHHHHHHHHHHc //