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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37860.1
DDBJ      :             formate dehydrogenase family accessory protein FdhD
Swiss-Prot:             

Homologs  Archaea  28/68 : Bacteria  482/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.97.1
:275 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   28->263 2pw9D PDBj 2e-20 31.8 %
:RPS:SCOP  25->263 2pw9A1  c.97.1.5 * 3e-52 31.2 %
:RPS:PFM   28->264 PF02634 * FdhD-NarQ 4e-45 44.8 %
:HMM:PFM   27->263 PF02634 * FdhD-NarQ 2e-77 40.9 232/236  
:BLT:SWISS 21->263 FDHD_AGRT5 4e-67 51.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37860.1 GT:GENE ABE37860.1 GT:PRODUCT formate dehydrogenase family accessory protein FdhD GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(704817..705644) GB:FROM 704817 GB:TO 705644 GB:DIRECTION - GB:PRODUCT formate dehydrogenase family accessory protein FdhD GB:PROTEIN_ID ABE37860.1 GB:DB_XREF GI:91681558 InterPro:IPR003786 LENGTH 275 SQ:AASEQ MRPTVQTTTTRTWRNGRMQDGARAIPEETPVAISYNGGTHAVMMATPADLEDFAIGFSLSEGVIDTPSQIDTFEIVPLDDGIELRMWIGGAEAERLQQRRRHIAGPTGCGLCGVDSITEALRPAAIVGAGGHFAPEQIIAAIEAMPPLQTLNIETRAVHAAAFWTSARGIVSLREDVGRHNALDKLAGALARQQIATGDGIVLLTSRVSVEMVQKTAALGAPLLVAVSAPTALAVRMAEAAGVTLAAIARADGFEVFSHPGRISGGTHEEATDVA GT:EXON 1|1-275:0| BL:SWS:NREP 1 BL:SWS:REP 21->263|FDHD_AGRT5|4e-67|51.4|243/271| SEG 2->17|rptvqttttrtwrngr| BL:PDB:NREP 1 BL:PDB:REP 28->263|2pw9D|2e-20|31.8|211/237| RP:PFM:NREP 1 RP:PFM:REP 28->264|PF02634|4e-45|44.8|232/234|FdhD-NarQ| HM:PFM:NREP 1 HM:PFM:REP 27->263|PF02634|2e-77|40.9|232/236|FdhD-NarQ| GO:PFM:NREP 2 GO:PFM GO:0008863|"GO:formate dehydrogenase activity"|PF02634|IPR003786| GO:PFM GO:0009326|"GO:formate dehydrogenase complex"|PF02634|IPR003786| RP:SCP:NREP 1 RP:SCP:REP 25->263|2pw9A1|3e-52|31.2|208/231|c.97.1.5| OP:NHOMO 605 OP:NHOMOORG 513 OP:PATTERN ------11111111111--1-111----------1--------1212111--1------1-111---- ---111-1111---11111-11--121111111111112111--1-11----1211-1----1-1121111--------1211----------------------1-1----------------------------11111---------11-----------------11------------11-11---1-12222222212222221111112211111---1111111-1111111111111111--11-----------------------------------------------------------------------11-1-----------1-----------1--11111111-111-------11-111------113111-1121111111111--11-1111111111--11111111112111--1111111111111111111111-12-------------------------------1-111-111-22221221111122111111112113333-12222211111-12133--11111----------21--111111211111--313-2121-11111-3211---11111--1-------131--2233----3-1-111222-2232211221111-------------11111111111111111-111111111111111111111111111111111111111111111111111--111111111111-------------1--21111111111111--111111-11111-11111121111112111----------111111111121111111111111------------------------------------------------------------11- -------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 213 STR:RPRED 77.5 SQ:SECSTR ###########################cEEEEEEETTEEEEEEEEccccHHHHHHHHHHHTTccccGGGEEEEEEETTTTEEEEEEccccccccccHHHHcccccccccccccHHHHHHHHHHHH######Tccc###############HHHHHcccEEEEEEETTE#EEEEEEEccHHHHHHHHHHHHHTTc#cccccEEEEcccccHHHHHHHHHTTccEEEEcccccHHHHHHHHHHTcEEEEEEETTEEEEEEcGGGc############ DISOP:02AL 1-6,271-271,275-276| PSIPRED ccccEEEEcEEEEccccEEEEEEEEEEEEEEEEEEccEEEEEEEEccccHHHHHHHHHHcccccccHHHEEEEEEEccccEEEEEEEEcccccHHHHHHccccccccccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHccEEEEEEEcccccEEEEEEEccHHHHHHHHHHHHHHccccHHcEEEEEEccccHHHHHHHHHccccEEEEEccccHHHHHHHHHHcccEEEEEEcccEEEEcccccccccccccccccc //