[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37878.1
DDBJ      :             Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  425/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.39.1
:351 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   5->322 1l4eA PDBj 6e-28 29.9 %
:RPS:PDB   9->300 1d0sA PDBj 1e-35 30.7 %
:RPS:SCOP  21->322 1j33A  c.39.1.1 * 6e-64 33.8 %
:HMM:SCOP  7->351 1d0vA_ c.39.1.1 * 1.9e-103 48.1 %
:RPS:PFM   11->322 PF02277 * DBI_PRT 4e-45 44.2 %
:HMM:PFM   14->344 PF02277 * DBI_PRT 1.3e-96 48.3 317/327  
:BLT:SWISS 18->322 COBT_DECAR 5e-48 37.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37878.1 GT:GENE ABE37878.1 GT:PRODUCT Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 727743..728798 GB:FROM 727743 GB:TO 728798 GB:DIRECTION + GB:PRODUCT Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase GB:PROTEIN_ID ABE37878.1 GB:DB_XREF GI:91681576 InterPro:IPR003200 InterPro:IPR008281 LENGTH 351 SQ:AASEQ MPIDTLAAWQPPLIAPVDRALEASLRARIDGKAKPLGSLGRIEELAIELGAISHPAEPRGDNAVLMVFAGDHGLNAEGVSQYPSAVTVAMVMTYLAGKACANAFATACRVDVQVIDSGVAAELPAHPDLIDAKVRMGTGNAAREPAMSAQDAALALTRGIELTVAEIKAGADIIALGEMGIGNTASSSLLLHRLAPAPLADCIGVGAGQDAPGMAKKRAAIEMAAARSDATAPFEVLCEFGGLEIAMMTGAILGAASQRRPVIVDGFIATAAALLAVRLAPAARGYCVFAHRSAERGHDIALQALRARPLLDLDLRLGEGTGAILAVPLLRAAARLSTDVADLSDVLEGKL GT:EXON 1|1-351:0| BL:SWS:NREP 1 BL:SWS:REP 18->322|COBT_DECAR|5e-48|37.4|302/348| SEG 185->200|assslllhrlapapla| SEG 214->227|makkraaiemaaar| SEG 269->283|ataaallavrlapaa| SEG 301->317|alqalrarplldldlrl| SEG 323->336|ailavpllraaarl| BL:PDB:NREP 1 BL:PDB:REP 5->322|1l4eA|6e-28|29.9|314/347| RP:PDB:NREP 1 RP:PDB:REP 9->300|1d0sA|1e-35|30.7|290/346| RP:PFM:NREP 1 RP:PFM:REP 11->322|PF02277|4e-45|44.2|308/335|DBI_PRT| HM:PFM:NREP 1 HM:PFM:REP 14->344|PF02277|1.3e-96|48.3|317/327|DBI_PRT| GO:PFM:NREP 2 GO:PFM GO:0008939|"GO:nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity"|PF02277|IPR003200| GO:PFM GO:0009236|"GO:cobalamin biosynthetic process"|PF02277|IPR003200| RP:SCP:NREP 1 RP:SCP:REP 21->322|1j33A|6e-64|33.8|302/333|c.39.1.1| HM:SCP:REP 7->351|1d0vA_|1.9e-103|48.1|343/346|c.39.1.1|1/1|Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)| OP:NHOMO 452 OP:NHOMOORG 427 OP:PATTERN -------------------------------------------------------------------- ---12-11111-2-1-111-1111111111111111-1111-1------------------1221111121----------11-----11-1-111-----11--1-1-----------------11111111111111111121--------------------------------------11111---11--------------1--1-------1111---------11---------------------------------11---------------------------------------------1----------1-11-------1-111111111111---1111111111--12-----1111-1---111-111111---2122211111111111-21111111-2--1111111111111111-111111111111111111-11-1111-------------------------------1--------1111111111111111111111111111--1112311111111-111111111----------111-1211-11111111-111211111-----2-1-----------------------------2-111-11-11111-1111111111111----11-------1---1--1111111111-111111111111111111-222--11-1111111111111111-1111111--1------------------------111-1---------------11111---111111111111111111111-------------11111111111--11111111------1-111111--------1---------------------------11-22-1-----1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 318 STR:RPRED 90.6 SQ:SECSTR ####cHHHHHHHTcccccHHHHHHHHHHHHTccccTTTTTHHHHHHHHHHTcGGGTcccccEEEEEEEEEccGGGGGTcccccTTHHHHHHHHHHHTccHHHHHHHHTTcEEEEEEEEccccccccTTcEEcccccccccTTTcccccHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEcTTTHHHHHHHHHHHHTccHHHHcccTTTccGGGHHHHHHHHHHHHHHHcTTcHHHHHHHHccHHHHHHHHHHHHHHHTTccEEcccHHHHHHHHHHHHHcGGGGGGEEcccccccTTHHHHHHHHTccccccccccccTTHH############################# PSIPRED ccHHHHHHHHHcccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccEEEEEEcccHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHccccEEEEEEEccccccccccHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEccccccccccHHHHHHHHccccHHHHccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHccHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHHHHcHHHHHHHHHHHccccHHHHHHHHHHHccccccccEEcccccHHHHHHHHHHHHHHHHcccccHHHHHcccc //