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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37891.1
DDBJ      :             NADH/Ubiquinone/plastoquinone (complex I)
Swiss-Prot:             

Homologs  Archaea  34/68 : Bacteria  673/915 : Eukaryota  44/199 : Viruses  0/175   --->[See Alignment]
d.58.34
:519 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   229->339 2c1wA PDBj 2e-12 8.7 %
:RPS:SCOP  222->297 1qd1A2  d.58.34.1 * 7e-06 10.8 %
:RPS:PFM   222->350 PF00361 * Oxidored_q1 5e-17 38.8 %
:HMM:PFM   128->347 PF00361 * Oxidored_q1 6.9e-39 27.6 217/270  
:HMM:PFM   70->106 PF00662 * Oxidored_q1_N 5.7e-09 24.3 37/62  
:HMM:PFM   395->419 PF05552 * TM_helix 0.00025 32.0 25/53  
:BLT:SWISS 67->349 NU5M_METSE 3e-33 28.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37891.1 GT:GENE ABE37891.1 GT:PRODUCT NADH/Ubiquinone/plastoquinone (complex I) GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(737830..739389) GB:FROM 737830 GB:TO 739389 GB:DIRECTION - GB:PRODUCT NADH/Ubiquinone/plastoquinone (complex I) GB:PROTEIN_ID ABE37891.1 GB:DB_XREF GI:91681589 InterPro:IPR001750 InterPro:IPR003916 LENGTH 519 SQ:AASEQ MPIHHLPLLAPIALLAVAAVSFANTGLRPKRLPGLAEAAALLALAAALASAAGLIVSGTHVSPVLGLYGAGFSLRLDAVSAVMLLLVSFIGWVVVRYAGTYLDGEARQGPFTGWLCMTLAAVLLLVTAGNLVQLVLCWIATSVFLHRLLLFYPDRLPARRAARKKLVTARLGDVALIGSAALLAAAYGTADIGSILQAARLGEGGSLAVGAAGLLAFAAVLKSAQFPAHGWLTEVMETPTPVSALLHAGVINAGGFLLIRFADVMLLAPAVLAALVMIGGFTAVFGGLVMLTQPAVKTSLAWSTVAQMGFMILECGLALFPVALLHIVAHSLYKAHSFLASGGAVERVAAIRRPGPVAIPDAGAVGRAFLAALVIYILVGLGFGLTHKSPQVVALGAILIFGVAYMLAQGFADAAPKALTLRTAVYAVATSVGYFALQSSATLLTASVLPATPTPGPLEWALIVIALVSFGLIAIVQAMFPLWAYHPAAAGLRVHLSNGFYANAVFDRLVGGWATRNAS GT:EXON 1|1-519:0| BL:SWS:NREP 1 BL:SWS:REP 67->349|NU5M_METSE|3e-33|28.4|282/600| TM:NTM 14 TM:REGION 4->26| TM:REGION 42->64| TM:REGION 77->99| TM:REGION 110->132| TM:REGION 135->157| TM:REGION 167->189| TM:REGION 205->227| TM:REGION 239->261| TM:REGION 269->291| TM:REGION 310->332| TM:REGION 361->383| TM:REGION 391->413| TM:REGION 427->449| TM:REGION 460->482| SEG 3->20|ihhlpllapiallavaav| SEG 35->54|laeaaallalaaalasaagl| SEG 118->128|tlaavlllvta| SEG 158->163|arraar| SEG 180->186|aallaaa| SEG 201->221|lgeggslavgaagllafaavl| SEG 264->277|vmllapavlaalvm| RP:PDB:NREP 1 RP:PDB:REP 229->339|2c1wA|2e-12|8.7|104/273| RP:PFM:NREP 1 RP:PFM:REP 222->350|PF00361|5e-17|38.8|129/268|Oxidored_q1| HM:PFM:NREP 3 HM:PFM:REP 128->347|PF00361|6.9e-39|27.6|217/270|Oxidored_q1| HM:PFM:REP 70->106|PF00662|5.7e-09|24.3|37/62|Oxidored_q1_N| HM:PFM:REP 395->419|PF05552|0.00025|32.0|25/53|TM_helix| GO:PFM:NREP 3 GO:PFM GO:0008137|"GO:NADH dehydrogenase (ubiquinone) activity"|PF00361|IPR001750| GO:PFM GO:0042773|"GO:ATP synthesis coupled electron transport"|PF00361|IPR001750| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00361|IPR001750| RP:SCP:NREP 1 RP:SCP:REP 222->297|1qd1A2|7e-06|10.8|65/140|d.58.34.1| OP:NHOMO 1240 OP:NHOMOORG 751 OP:PATTERN 11-1----------1-3-112---21122422-----------11-1112322-1--1-2-2112-11 2222121222211121111-11--12111111222222221112-212311-11111---13111322232--------11133312111111---1--1-111-22331--------------1211212211224443422221332233233222222222232233311111111111111211---11122222222222222221221222132322111111111113333333333333322323----------------------------------------------------------------------11--1------------------1----3--1-2211--1112--11---222111222222111334324343322222222222-22222121211113342342224321122433434433211111111322-112322112111221111111111111112222112-1-2222211111121111221111111111122211122111322221121223321221111111123421221--111-222112-222123226222214-2111111111111111111111121222111-3-12-11------2------112-321--522211111111221112221211111-2222211221212122222111211121111111111111111111122221-211111111111111122221222231121----1----------222222211131222222214222232221111111113----22212-----22323223331111111-111111-------------------------------------1--------131 ---------------------------111---111-----------1------121-----2-1----------------------------1---11------1------11112-----1-11-1-12--11-----1--11--------1-1-------1-112----12-1----------1-4--2------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 104 STR:RPRED 20.0 SQ:SECSTR ####################################################################################################################################################################################################################################ccccccccccccccEEEEcHHHHTTTcTHHHHHH#######HHHHHHHcccccccccHHHHHHHHHHHHHHTTcHHHHHHHHHHHHTTcccccHHHHHHHHHccccccccc#################################################################################################################################################################################### DISOP:02AL 1-1,517-520| PSIPRED ccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHcHHHHHHcc //