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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37927.1
DDBJ      :             short-chain dehydrogenase/reductase SDR
Swiss-Prot:             

Homologs  Archaea  31/68 : Bacteria  776/915 : Eukaryota  169/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:259 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   52->190 2japC PDBj 2e-16 33.8 %
:RPS:PDB   1->189 1dohB PDBj 8e-28 17.5 %
:RPS:PDB   165->206 3e9nE PDBj 7e-08 35.7 %
:RPS:SCOP  1->189 1bdbA  c.2.1.2 * 1e-23 18.6 %
:HMM:SCOP  2->260 1jtvA_ c.2.1.2 * 3.2e-54 30.0 %
:RPS:PFM   4->171 PF00106 * adh_short 6e-08 28.9 %
:RPS:PFM   158->225 PF02399 * Herpes_ori_bp 1e-04 36.8 %
:HMM:PFM   5->170 PF00106 * adh_short 1.8e-32 28.4 162/167  
:BLT:SWISS 1->188 FABG_CHLMU 8e-16 25.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37927.1 GT:GENE ABE37927.1 GT:PRODUCT short-chain dehydrogenase/reductase SDR GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 774216..774995 GB:FROM 774216 GB:TO 774995 GB:DIRECTION + GB:PRODUCT short-chain dehydrogenase/reductase SDR GB:PROTEIN_ID ABE37927.1 GB:DB_XREF GI:91681625 InterPro:IPR002198 InterPro:IPR002347 InterPro:IPR002424 LENGTH 259 SQ:AASEQ MTERVTLITGASAGIGAELARIFAANAHRVALVARRADRLEALAAEIIAKGGPEPIIIACDLGKPEGADEIVARLAAAGVEVEYLVNNAGYGLFGRAAEIDRADQLGIIDLNIRALTDLSLRFADSVTRLRGGILNVASIAGFMPGPGMAVYYASKAYVLSLSEALHQELGKKGVRVTAICPGPVPTEFQLRASIEPGIDSAILNVSPAEVARQGYQGLMNNKRLVLPGVGVKIVPFLLRFFPRGFVLAAVGGFQQRQR GT:EXON 1|1-259:0| BL:SWS:NREP 1 BL:SWS:REP 1->188|FABG_CHLMU|8e-16|25.0|188/248| SEG 24->49|aanahrvalvarradrlealaaeiia| BL:PDB:NREP 1 BL:PDB:REP 52->190|2japC|2e-16|33.8|139/246| RP:PDB:NREP 2 RP:PDB:REP 1->189|1dohB|8e-28|17.5|189/271| RP:PDB:REP 165->206|3e9nE|7e-08|35.7|42/182| RP:PFM:NREP 2 RP:PFM:REP 4->171|PF00106|6e-08|28.9|166/169|adh_short| RP:PFM:REP 158->225|PF02399|1e-04|36.8|68/694|Herpes_ori_bp| HM:PFM:NREP 1 HM:PFM:REP 5->170|PF00106|1.8e-32|28.4|162/167|adh_short| GO:PFM:NREP 5 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| GO:PFM GO:0003688|"GO:DNA replication origin binding"|PF02399|IPR003450| GO:PFM GO:0005524|"GO:ATP binding"|PF02399|IPR003450| GO:PFM GO:0006260|"GO:DNA replication"|PF02399|IPR003450| RP:SCP:NREP 1 RP:SCP:REP 1->189|1bdbA|1e-23|18.6|188/267|c.2.1.2| HM:SCP:REP 2->260|1jtvA_|3.2e-54|30.0|257/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 4034 OP:NHOMOORG 976 OP:PATTERN --1---2322222232-2--11--41132133-1----------1--1----1---------212-23 3881C114--1232FEA55-5822BJ555559EEHEDDKM1626A6612111445514--87439497D33-111---11418--1--2222-223---357264S8A271111111-------322154323223644342212285894335522-1--21123798G5--11-----1--8454421163844444666455577564664555636576834222428C2222222122222224222332515614111223334221223323333212112111111111111121122322223222211122232222522222222222244234412--1222-11-11111431111-321123H7751111135E9A1228536544433444335-78F67D9B9FB-GFF6IEIFKIHB7B4556486547241333333334353234211------------22-----1--1----227A6336545IDGHHI44444CCFF656536KCK9LF813668837358576E7255-123441222222--3342393411121-1112-141-432133836BE-11332211111-111-11111111----424214-171-133341322--32231323--11221------44485635774555555-755555554575533543389862-236344445555455543A4434444--222222222222---3121115544177851113131--11111277578461327489577ACBDA9A88869222222222--224222222112234656553332121--12663333--------1-1----------1--------------22-3-15121361 1---B62-11----4245587758798134233222453443422244544395553131-111311-2211112-1-111111--15-2644281332-111432-282L364421-12-11-13-1-141-1-3113-1114-2211-2--2-3146JNB29638659B3DB72233711228356B4934364333 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 259 STR:RPRED 100.0 SQ:SECSTR cTTcEEEETTTTcHHHHHHHHHHHHTTcEEEEEEcccHHHHHHHHHHHHHTTccEEEEEccTTcHHHHHHHHHHHHHHHccccEEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHccTTcEEEEEccGGGTcccccccHHHHHHHHHHHHHHHHHHHHHGGGTcEEEEEEEcccccHHHHHHHTTTcccccHHHccHHHHHHHHHHHHHTTccEEEEEcccccHHHHHccHHHHHHHHTTcccHHHHH DISOP:02AL 1-1,258-260| PSIPRED ccccEEEEEccccHHHHHHHHHHHccccEEHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEccccccHHHHHccccHHHHHHHHcccHHHHHHHHHHHHcccccEEEcHHHHHHHHHHHHHcccHHHHHHccHHHHccc //