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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37971.1
DDBJ      :             cytochrome c oxidase, cbb3-type, subunit III
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  202/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.3.1
:293 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   108->197 1hj5A PDBj 2e-05 37.7 %
:BLT:PDB   211->287 1ls9A PDBj 3e-07 48.5 %
:RPS:PDB   73->245 2d0wA PDBj 5e-21 13.8 %
:RPS:SCOP  111->200 1h1oA2  a.3.1.4 * 1e-12 21.5 %
:RPS:SCOP  173->293 1mg2D  a.3.1.1 * 2e-16 19.5 %
:HMM:SCOP  34->202 2mtaC_ a.3.1.1 * 2.4e-31 36.6 %
:HMM:SCOP  210->292 2mtaC_ a.3.1.1 * 5.9e-24 42.5 %
:HMM:PFM   115->200 PF00034 * Cytochrom_C 7.7e-12 28.6 84/91  
:HMM:PFM   212->289 PF00034 * Cytochrom_C 3.6e-13 31.2 77/91  
:BLT:SWISS 117->202 CYC6_EUGGR 2e-06 38.2 %
:BLT:SWISS 210->291 CYC6_PAVLU 9e-08 34.6 %
:TM
:REPEAT 2|115->202|212->291

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37971.1 GT:GENE ABE37971.1 GT:PRODUCT cytochrome c oxidase, cbb3-type, subunit III GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 823280..824161 GB:FROM 823280 GB:TO 824161 GB:DIRECTION + GB:PRODUCT cytochrome c oxidase, cbb3-type, subunit III GB:PROTEIN_ID ABE37971.1 GB:DB_XREF GI:91681669 InterPro:IPR003088 InterPro:IPR004678 InterPro:IPR008168 InterPro:IPR009056 LENGTH 293 SQ:AASEQ MADHSHHAEIDKVTGTATTGHEWDGIKELNTPLPRWWIWTFYATIVWSLGYFVVYPAWPLVDGYTKGLFGYSSRAELAVELAKLDAVRGGKMAVLATAPLADIEKDPGLLALARAKGKVVFGDNCAPCHGSGAAGSKGFPNLNDDDWLWGGSLEQIEQTIKYGARSGHDDAHQGNMPAFGKDGLLTAEQIVTVVNYVRSLSGLSTRPGSDLAAGKQVFAETCSSCHGDEAKGNPELGSPNLTDKIWLYGSDEATMIDTLTNGRGGVMPAWAGRLDPATIKAMTVYVHSLGGGK GT:EXON 1|1-293:0| BL:SWS:NREP 2 BL:SWS:REP 117->202|CYC6_EUGGR|2e-06|38.2|76/87| BL:SWS:REP 210->291|CYC6_PAVLU|9e-08|34.6|81/83| TM:NTM 1 TM:REGION 38->60| NREPEAT 1 REPEAT 2|115->202|212->291| BL:PDB:NREP 2 BL:PDB:REP 108->197|1hj5A|2e-05|37.7|77/559| BL:PDB:REP 211->287|1ls9A|3e-07|48.5|68/91| RP:PDB:NREP 1 RP:PDB:REP 73->245|2d0wA|5e-21|13.8|159/168| HM:PFM:NREP 2 HM:PFM:REP 115->200|PF00034|7.7e-12|28.6|84/91|Cytochrom_C| HM:PFM:REP 212->289|PF00034|3.6e-13|31.2|77/91|Cytochrom_C| RP:SCP:NREP 2 RP:SCP:REP 111->200|1h1oA2|1e-12|21.5|79/90|a.3.1.4| RP:SCP:REP 173->293|1mg2D|2e-16|19.5|118/147|a.3.1.1| HM:SCP:REP 34->202|2mtaC_|2.4e-31|36.6|123/147|a.3.1.1|1/2|Cytochrome c| HM:SCP:REP 210->292|2mtaC_|5.9e-24|42.5|80/147|a.3.1.1|2/2|Cytochrome c| OP:NHOMO 237 OP:NHOMOORG 202 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------11-111--1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-11111------1111--21111111111111111---1--2--121--11121231133111111111111112-------------111-------------------------------111--1111------------------------11111111111111111111111312111111--1----1111--------------------1------1---11111111111------------1---11-111111111211111111111122111----1-2--------------------------------------------------------------------------------------------1----------11------------------------1111122222223222222111---------111111111121111--------------111---11-------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 221 STR:RPRED 75.4 SQ:SECSTR ########################################################################TTTcccccHHHHccccccccHHHHHHHHHcccTTTTcGGGHHHHHHHHHHHHTHHHHcTTcccccccccccccccGGGGcHHHHHHHHHHcccHHHccTTcTTccccTHHTTccHHHHHHHHHHHHHTccHHHcccTTcTTccHHHHHHcccccHHHHHHTHHHHHHTcccccETTTTEEEcHHHHHHHHHTTcTTcccccTTcHHHHHHHHHHHHHTTTc DISOP:02AL 1-14,172-174,291-294| PSIPRED cccccccccccccccccccccccccHHHHcccccccHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHcccHHHHHHHHHHcccccccccHHcccHHHHHHHHHHHHHHcccc //