[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE37980.1
DDBJ      :             KaiB
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  65/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:92 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->89 1wwjC PDBj 1e-20 53.0 %
:RPS:PDB   7->63 2b5eA PDBj 2e-04 17.5 %
:RPS:SCOP  1->79 1t4yA  c.47.1.15 * 7e-10 30.8 %
:HMM:SCOP  3->89 1t4zA_ c.47.1.15 * 2.2e-22 48.2 %
:RPS:PFM   9->89 PF07689 * KaiB 5e-19 60.5 %
:HMM:PFM   9->87 PF07689 * KaiB 1.7e-29 46.8 79/82  
:BLT:SWISS 6->89 KABL1_SYNY3 2e-25 59.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE37980.1 GT:GENE ABE37980.1 GT:PRODUCT KaiB GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 831935..832213 GB:FROM 831935 GB:TO 832213 GB:DIRECTION + GB:PRODUCT KaiB GB:PROTEIN_ID ABE37980.1 GB:DB_XREF GI:91681678 InterPro:IPR011649 LENGTH 92 SQ:AASEQ MADPIKLVLYVAGETPKSLAAIRNLEKICAEHLAGKYKVEVVDLKKSPQLAREHGIVAIPTLVKELPVPIRKIIGDLSDTPKVLVHLSVEGS GT:EXON 1|1-92:0| BL:SWS:NREP 1 BL:SWS:REP 6->89|KABL1_SYNY3|2e-25|59.5|84/108| BL:PDB:NREP 1 BL:PDB:REP 7->89|1wwjC|1e-20|53.0|83/98| RP:PDB:NREP 1 RP:PDB:REP 7->63|2b5eA|2e-04|17.5|57/483| RP:PFM:NREP 1 RP:PFM:REP 9->89|PF07689|5e-19|60.5|81/82|KaiB| HM:PFM:NREP 1 HM:PFM:REP 9->87|PF07689|1.7e-29|46.8|79/82|KaiB| GO:PFM:NREP 1 GO:PFM GO:0048511|"GO:rhythmic process"|PF07689|IPR011649| RP:SCP:NREP 1 RP:SCP:REP 1->79|1t4yA|7e-10|30.8|78/105|c.47.1.15| HM:SCP:REP 3->89|1t4zA_|2.2e-22|48.2|83/0|c.47.1.15|1/1|Thioredoxin-like| OP:NHOMO 104 OP:NHOMOORG 68 OP:PATTERN -------------------------------------------23-------2--------------- -----------------------------------------------------------------------------------------------------2---1----------------------------2-32211-----13313331111111111232-2221111111111111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------22---1-1--------------22-22-22------------------------11-1------------------1--------------------------------------------------------------------------------------------------------------------------2----------------------------------------------------------------------------11---------------------------------------------------------------------------------------------------11-1--1----------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 89 STR:RPRED 96.7 SQ:SECSTR HHHHccEEEEEcTTcHHHHHHHHHHHHHHHHTTTTTcEEEEEETTTcHHHHHHTTcccccEEEETccHHHTEEEEcHHHTcccEEEEEE### DISOP:02AL 1-1,91-93| PSIPRED ccccEEEEEEEEcccHHHHHHHHHHHHHHHHHcccEEEEEEEEccccHHHHHHccEEEccEEHHHccccHHHHHcccccHHHHHHHcccccc //