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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38008.1
DDBJ      :             diguanylate cyclase/phosphodiesterase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  631/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
c.1.33d.110.3d.58.29
:610 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   162->319 3iclA PDBj 2e-19 39.1 %
:BLT:PDB   329->554 3ii8B PDBj 2e-24 33.5 %
:RPS:PDB   64->365 3btaA PDBj 2e-40 8.0 %
:RPS:PDB   336->591 2basB PDBj 1e-38 19.1 %
:RPS:SCOP  48->149 1p97A  d.110.3.7 * 1e-05 12.7 %
:RPS:SCOP  164->320 1w25A3  d.58.29.2 * 4e-32 27.4 %
:RPS:SCOP  350->570 2basA1  c.1.33.1 * 4e-43 24.2 %
:HMM:SCOP  51->155 1dp6A_ d.110.3.2 * 5e-07 26.7 %
:HMM:SCOP  164->322 1w25A3 d.58.29.2 * 4.4e-48 42.4 %
:HMM:SCOP  334->576 2basA1 c.1.33.1 * 6.2e-62 39.5 %
:RPS:PFM   159->311 PF00990 * GGDEF 8e-29 46.4 %
:RPS:PFM   337->570 PF00563 * EAL 2e-40 40.5 %
:HMM:PFM   334->570 PF00563 * EAL 6.9e-58 37.3 233/236  
:HMM:PFM   159->313 PF00990 * GGDEF 3e-43 42.6 155/161  
:HMM:PFM   48->149 PF08448 * PAS_4 4.9e-07 27.5 102/110  
:BLT:SWISS 144->571 GMR_ECOLI 2e-66 34.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38008.1 GT:GENE ABE38008.1 GT:PRODUCT diguanylate cyclase/phosphodiesterase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION complement(862465..864297) GB:FROM 862465 GB:TO 864297 GB:DIRECTION - GB:PRODUCT diguanylate cyclase/phosphodiesterase GB:PROTEIN_ID ABE38008.1 GB:DB_XREF GI:91681706 InterPro:IPR000160 InterPro:IPR001633 LENGTH 610 SQ:AASEQ MSSAAKSYPAKMTAELAADRAAIAAPQDRLPEDNNAIDLQLLEEIIRALPAAVTVLDDRGDFLIVNDAAASRLNVPPSGHAASVVSLNPAIEQRRAEAVALLATGRPATKEERAGHGATARTFLTAHRPVEIGSRRLLLSSSLDITEQKAIENELFRRAYFDDLTGLPNRSVIERRADALLQAGGPPNRFALAFLDVDNFKHINDYYGHAVGDALLVGIAKRLGLELRETDMLSRISGDEFLLLLNPIESQGEVADYIDFLLRRLKAPFYIDGSEVFASASTGVSLYPEHGRSFDALRQNADTAMYRVKSATKGAAAMFDTAMEREALERMSIEQSLRQAILDKRFCCAFQPKVDIRTREIKGIEALVRLRDDNGVIQAPGTFVELAVELGLIDELTHLVLAEIMKSIDLINETFGAGASISINVAAKQAGNYNFMQSFATALAATECPSRFIVEVTEDAFVAKNHFQSEILPLLRQVGVGISIDDFGIGYSSLSALADITADEIKIDRSFITDIHKRPRSQSILKAIESLSEALGMTMIAEGLETFEELAYLQAATKIRYAQGYYFSKPVFLDDLKPSAPEFSSGRPPPYGRRIEAPRPVFSRSSGGRR GT:EXON 1|1-610:0| BL:SWS:NREP 1 BL:SWS:REP 144->571|GMR_ECOLI|2e-66|34.9|421/661| SEG 14->25|aelaadraaiaa| SEG 134->143|srrlllsssl| BL:PDB:NREP 2 BL:PDB:REP 162->319|3iclA|2e-19|39.1|156/159| BL:PDB:REP 329->554|3ii8B|2e-24|33.5|221/256| RP:PDB:NREP 2 RP:PDB:REP 64->365|3btaA|2e-40|8.0|286/1277| RP:PDB:REP 336->591|2basB|1e-38|19.1|246/387| RP:PFM:NREP 2 RP:PFM:REP 159->311|PF00990|8e-29|46.4|153/160|GGDEF| RP:PFM:REP 337->570|PF00563|2e-40|40.5|232/236|EAL| HM:PFM:NREP 3 HM:PFM:REP 334->570|PF00563|6.9e-58|37.3|233/236|EAL| HM:PFM:REP 159->313|PF00990|3e-43|42.6|155/161|GGDEF| HM:PFM:REP 48->149|PF08448|4.9e-07|27.5|102/110|PAS_4| RP:SCP:NREP 3 RP:SCP:REP 48->149|1p97A|1e-05|12.7|102/114|d.110.3.7| RP:SCP:REP 164->320|1w25A3|4e-32|27.4|157/162|d.58.29.2| RP:SCP:REP 350->570|2basA1|4e-43|24.2|211/257|c.1.33.1| HM:SCP:REP 51->155|1dp6A_|5e-07|26.7|105/0|d.110.3.2|1/1|PYP-like sensor domain (PAS domain)| HM:SCP:REP 164->322|1w25A3|4.4e-48|42.4|158/0|d.58.29.2|1/1|Nucleotide cyclase| HM:SCP:REP 334->576|2basA1|6.2e-62|39.5|238/0|c.1.33.1|1/1|EAL domain-like| OP:NHOMO 9874 OP:NHOMOORG 639 OP:PATTERN -------------------------------------------------------------------- HA17C---111---16422-2E44-122222-A4447D75EHDYr-------657-----DA3-F4I5553----1----H17CFN9B--------------------1----------------111111111-19AA9711196kUTGML233FF---3--EN8-CBH3------------L5B538718C2777775672777777-32223777495F1ON543554BD--------------------------3----11---1-----------------------------------------------------6CB8L777777796B3TBA5687A58--5DE6AFDID5658B633462--9488BB51111137bSVC9HYRMSY68A968A6A8G-VQQPPAMRBP51MQQSWZPZacHHTEBIC4C2BF9A9A6--------GII5-mEY11111111221122222222222121111-9BIA5GCB52LIIJJIG8887JJUcBBBB79OWVCOGY-3SRKZFcKMb14oB6RRUUOchdP-------88HQmq5ILHFKJOBcSJHL-JFJdFIEWP5545B664L896-11111----------VKTXG43jbIdmdpSpXtwtqtskqcqongnlfcfwx---EeHg------LQGB5UCMMMLMLNNMK-JNKONHIMLLKMLJLLKLLQTNIK--1F9DGFGFFFFFHFGGFEBCA98EC1-H56666645666---W-1-1-JLKLGAvKo---------------9899936-2-HaZabXbieegbbZZUUXY-----2---ZKUUPabZaZgec*yONSWTWSKKP3222--a-EE97HI111111--71B-------------------------765A87A657--- ----1---------------------------------------------------------------------------------------------------------------------------------------------------------3----4---------D2----------2--D-----9---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 568 STR:RPRED 93.1 SQ:SECSTR #######################################cTTcccEEcTTEEEEEEcTTccEEcccGGccccTTccccccccHHHcHHHHHHcEEEEEcccccccccEEEEETEEEEEEEcccccGGGcEcccccccccccccccccTTTTccHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHTccccccTTccTTcccccGGGEEEEEcTTccEEEEEccEEEEEccccTTccEEEccccccccTTTccccccEEEEccccEEcEEccccGGGTcTTcccccEEccHHHHHHTTccccTTcccccccccccccccccccHHHHHHHcTTGGGGccHHHHHHHHHHHHHHHHHHHHHHHTccHcccHHHHHHHHHHHHHHHTTcccccccEEccccccTTccEETTTTEEGGGGccccccccccEEccccccccccccEEcGGGcccccccccTTTcccccccHHHHHHHHHHHHccHHHHHHHHTTHHHHHHHHHHHHHHHHTTcccHTTcccHHHHHHHHHHHHHccccccccEEcccccEEEEEcTTccHcHHHHHHHHHTcccccccccTTTTHHHHHHHHHHHTcccccHHTccccccc### DISOP:02AL 1-12,28-36,583-611| PSIPRED cccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccEEEEcHHHHHHHcccHHHHHcccccccccHHHHHHHHHHHHHcccEEEEEEEcccccEEEEEEEEEEEEccccEEEEEcccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccEEEEEEEcccHHHHHHHccHHHHHHHHHHHHHHHHHHcccccEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHccEEEccEEEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHcccccEEEEcHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEcccccEEEEEEEEEEEcccccEEcHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccHHHHccccHHHHHHHHHHHcccccEEEEEEEHHHHHccHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHccccEEEEcHHHHccccccHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHccccccccccccccccHHHcccccccc //