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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38022.1
DDBJ      :             peptidase C14, caspase catalytic subunit p20
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  41/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.17.1
:291 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   58->280 2ar9D PDBj 2e-28 19.6 %
:RPS:SCOP  58->272 1cp3A  c.17.1.1 * 1e-21 20.4 %
:HMM:SCOP  18->280 1sc3.1 c.17.1.1 * 1.2e-42 27.2 %
:RPS:PFM   60->239 PF00656 * Peptidase_C14 1e-10 31.8 %
:HMM:PFM   58->272 PF00656 * Peptidase_C14 1.7e-29 22.2 203/243  
:BLT:SWISS 58->285 MALT1_MOUSE 3e-07 28.1 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38022.1 GT:GENE ABE38022.1 GT:PRODUCT peptidase C14, caspase catalytic subunit p20 GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 881484..882359 GB:FROM 881484 GB:TO 882359 GB:DIRECTION + GB:PRODUCT peptidase C14, caspase catalytic subunit p20 GB:PROTEIN_ID ABE38022.1 GB:DB_XREF GI:91681720 InterPro:IPR001309 InterPro:IPR011600 LENGTH 291 SQ:AASEQ MTFRAPGLSRRSMTTIAALIGVVSLAIGAHAALNKRVGDVDPAKDAARIEGNGPTASRFALVIGNGRYPDASEPLIQPINDARALSGALRREGFDVDMIEDARRDDMLQAVERMKARVTKDSTVVLFFGGYGIQSGRESYMIPVDANIWNEADVRRTGVSIESVLGEMRERGVHAKLAIIDASRRNPYERRFRSYSHGLAPINAPANALVLSSTTPGKVAEDGEGQNSVLVGALLGSISSRLASAEAAFTKARLAVTRATNGAQVPSLTSSLVDDVKLAPVTADATPASGG GT:EXON 1|1-291:0| BL:SWS:NREP 1 BL:SWS:REP 58->285|MALT1_MOUSE|3e-07|28.1|217/832| TM:NTM 1 TM:REGION 12->34| RP:PDB:NREP 1 RP:PDB:REP 58->280|2ar9D|2e-28|19.6|204/231| RP:PFM:NREP 1 RP:PFM:REP 60->239|PF00656|1e-10|31.8|170/224|Peptidase_C14| HM:PFM:NREP 1 HM:PFM:REP 58->272|PF00656|1.7e-29|22.2|203/243|Peptidase_C14| GO:PFM:NREP 2 GO:PFM GO:0004197|"GO:cysteine-type endopeptidase activity"|PF00656|IPR011600| GO:PFM GO:0006508|"GO:proteolysis"|PF00656|IPR011600| RP:SCP:NREP 1 RP:SCP:REP 58->272|1cp3A|1e-21|20.4|196/232|c.17.1.1| HM:SCP:REP 18->280|1sc3.1|1.2e-42|27.2|250/0|c.17.1.1|1/1|Caspase-like| OP:NHOMO 152 OP:NHOMOORG 44 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------1----------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------14GHA25153677--------------7--A---7--1---11-121---2-----22-11------------------------------------------------------------------------11-------11------1---------------6------------------1----2-----4-------1------------1---------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------21----------------------------------------------------------------3------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 233 STR:RPRED 80.1 SQ:SECSTR ############################################cccccccccc###EEEEEEEcccccTTTcccTTHHHHHHHHHHHHHHTTEEEEEEEcccHHHHHHHHHHHHHccGGGccEEEEEEcccccccccccccEEEcTHHTccEEEHHHHHHHTcTTTcGGGTTccEEEEEEcccccccccEEEEEccccccccTTccEEEEEEcccccccTTcTTcccHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHcccccccEEEEcccccccccc########### DISOP:02AL 1-6,48-52,284-292| PSIPRED ccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEccccccccccccccHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHcccccEEEEEEEcccEEEccccEEEEcccccccHHHHHHccEEHHHHHHHHHHcccccEEEEEEcccccccccccccccccHHcccccccEEEEEEcccccEEccccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccEEEEEcccccEEEEccccccccccccc //