[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38045.1
DDBJ      :             3-hydroxyacyl-CoA dehydrogenase, NAD-binding
Swiss-Prot:             

Homologs  Archaea  36/68 : Bacteria  620/915 : Eukaryota  182/199 : Viruses  0/175   --->[See Alignment]
a.100.1c.14.1c.2.1
:738 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->727 1wdlA PDBj 4e-95 33.5 %
:RPS:PDB   2->326 1dciA PDBj 2e-40 19.4 %
:RPS:PDB   328->410 2aefB PDBj 9e-09 12.0 %
:RPS:PDB   382->610 1e9yA PDBj 1e-33 14.5 %
:RPS:PDB   638->718 3ctvA PDBj 7e-08 23.2 %
:RPS:SCOP  1->322 1wdkA4  c.14.1.3 * 4e-51 32.2 %
:RPS:SCOP  329->494 1dliA2  c.2.1.6 * 4e-21 15.7 %
:RPS:SCOP  510->628 1wdkA1  a.100.1.3 * 1e-25 24.1 %
:RPS:SCOP  634->727 1wdkA2  a.100.1.3 * 1e-21 35.5 %
:HMM:SCOP  1->322 1wdkA4 c.14.1.3 * 3e-71 36.6 %
:HMM:SCOP  324->509 1f0yA2 c.2.1.6 * 1.9e-55 45.7 %
:HMM:SCOP  509->652 1wdkA1 a.100.1.3 * 4.7e-25 36.8 %
:HMM:SCOP  633->728 1wdkA2 a.100.1.3 * 2.4e-20 37.0 %
:RPS:PFM   16->201 PF00378 * ECH 3e-35 48.5 %
:RPS:PFM   329->508 PF02737 * 3HCDH_N 4e-40 48.3 %
:RPS:PFM   510->605 PF00725 * 3HCDH 1e-12 43.0 %
:RPS:PFM   620->659 PF08741 * YwhD 8e-04 43.6 %
:RPS:PFM   650->727 PF00725 * 3HCDH 3e-06 34.9 %
:HMM:PFM   329->507 PF02737 * 3HCDH_N 5.5e-61 42.5 179/180  
:HMM:PFM   17->202 PF00378 * ECH 1.2e-43 46.2 169/170  
:HMM:PFM   510->607 PF00725 * 3HCDH 2.7e-24 37.9 95/97  
:BLT:SWISS 6->727 FADJ_IDILO e-102 34.8 %
:PROS 117->137|PS00166|ENOYL_COA_HYDRATASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38045.1 GT:GENE ABE38045.1 GT:PRODUCT 3-hydroxyacyl-CoA dehydrogenase, NAD-binding GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 910168..912384 GB:FROM 910168 GB:TO 912384 GB:DIRECTION + GB:PRODUCT 3-hydroxyacyl-CoA dehydrogenase, NAD-binding GB:PROTEIN_ID ABE38045.1 GB:DB_XREF GI:91681743 InterPro:IPR000205 InterPro:IPR001753 InterPro:IPR006108 InterPro:IPR006176 InterPro:IPR011128 LENGTH 738 SQ:AASEQ MSYSNFKIETDSDGIALVTWDLPGRSMNVLDTKTIEELGAIVEQTTKDAAVKGVVITSAKEAFCAGADLSMLEGMNKTFAQIRKEKGEEAAQQMLFDESRKLSQILRGIETSGKPWVAAINGLALGGGFEVTLACHYRVAADNPKTRLGLPEIKVGLFPGGGGTQRIPRIVQPQDSLTILLKGDQIKLDKAKAWKLVDAVVPAADLIKAAKDWIKGGGKAVAPWDEKGFKLPGGPVFSKQGMMMFPAGNAIYRRETYDNYPAARAIMSCVYEGLQVPMDVALRIESRYFAQVVQTKEAAAMIRSLFLSMQELNKGARRPQGVPPTKVKKLAIIGAGFMGASVGYVSAKAGIDVVLIDRDQESADKGKAHCKSVIDGLIAKGRAKEADRDALLARITATPDFNAIKDCDLVIEAVFEDRKVKADTYAKAQPLLKEGAIFASNTSTLPINSLAEEFKDQSKFIGIHFFSPVEKMMLVEVIMGNNTGDVALATALDYTRQIGKTPIVVNDSRGFFANRCVLRFTAEGLEMLLEGVPPAMIETAAKMAGMPVGPLSLADEVALDLIVKIMKATEVDLGEQAVDQAQKKLMIEMVEKQGRFGRKNAKGFYDYPEKGKGQKALWSGIGALQPKQLDPDTIDVEELKQRFLVVQAVEAARTVEDNVIVDPREADVGSILGFGFAPFTGGTLSYIDFMGTKEFVALCHKLEGKFGSRFTPPKLLEDMAKTGDTFYHRFAPKKQAAA GT:EXON 1|1-738:0| BL:SWS:NREP 1 BL:SWS:REP 6->727|FADJ_IDILO|e-102|34.8|696/708| PROS 117->137|PS00166|ENOYL_COA_HYDRATASE|PDOC00150| BL:PDB:NREP 1 BL:PDB:REP 14->727|1wdlA|4e-95|33.5|690/715| RP:PDB:NREP 4 RP:PDB:REP 2->326|1dciA|2e-40|19.4|273/275| RP:PDB:REP 328->410|2aefB|9e-09|12.0|83/219| RP:PDB:REP 382->610|1e9yA|1e-33|14.5|220/238| RP:PDB:REP 638->718|3ctvA|7e-08|23.2|76/90| RP:PFM:NREP 5 RP:PFM:REP 16->201|PF00378|3e-35|48.5|169/170|ECH| RP:PFM:REP 329->508|PF02737|4e-40|48.3|180/180|3HCDH_N| RP:PFM:REP 510->605|PF00725|1e-12|43.0|93/97|3HCDH| RP:PFM:REP 620->659|PF08741|8e-04|43.6|39/163|YwhD| RP:PFM:REP 650->727|PF00725|3e-06|34.9|74/97|3HCDH| HM:PFM:NREP 3 HM:PFM:REP 329->507|PF02737|5.5e-61|42.5|179/180|3HCDH_N| HM:PFM:REP 17->202|PF00378|1.2e-43|46.2|169/170|ECH| HM:PFM:REP 510->607|PF00725|2.7e-24|37.9|95/97|3HCDH| GO:PFM:NREP 8 GO:PFM GO:0003824|"GO:catalytic activity"|PF00378|IPR001753| GO:PFM GO:0008152|"GO:metabolic process"|PF00378|IPR001753| GO:PFM GO:0006631|"GO:fatty acid metabolic process"|PF02737|IPR006176| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF02737|IPR006176| GO:PFM GO:0006631|"GO:fatty acid metabolic process"|PF00725|IPR006108| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00725|IPR006108| GO:PFM GO:0006631|"GO:fatty acid metabolic process"|PF00725|IPR006108| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00725|IPR006108| RP:SCP:NREP 4 RP:SCP:REP 1->322|1wdkA4|4e-51|32.2|307/310|c.14.1.3| RP:SCP:REP 329->494|1dliA2|4e-21|15.7|159/196|c.2.1.6| RP:SCP:REP 510->628|1wdkA1|1e-25|24.1|116/117|a.100.1.3| RP:SCP:REP 634->727|1wdkA2|1e-21|35.5|93/95|a.100.1.3| HM:SCP:REP 1->322|1wdkA4|3e-71|36.6|306/0|c.14.1.3|1/1|ClpP/crotonase| HM:SCP:REP 324->509|1f0yA2|1.9e-55|45.7|186/0|c.2.1.6|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 509->652|1wdkA1|4.7e-25|36.8|125/125|a.100.1.3|1/2|6-phosphogluconate dehydrogenase C-terminal domain-like| HM:SCP:REP 633->728|1wdkA2|2.4e-20|37.0|92/95|a.100.1.3|2/2|6-phosphogluconate dehydrogenase C-terminal domain-like| OP:NHOMO 4530 OP:NHOMOORG 838 OP:PATTERN 11-1--5B98A99987-121221D6333213711---------------------------3541-22 3664E3-6--2343DBA77-7B33AK66666BC9A9DLZa3C6B32361311646656--77D-9ABE9B4-----1111319---------1-321--5-343384544--------------11111121113144453---573112--11111-----11-1--111------------44423---7656666656858685565966557867C88652111111B311111111111111121112--1----1-----11---1----1--1111---------------------------------------2-1255222222232413443332-3-416123-99272B-29---2--2-5-1D77A-----53KCC433EACAA899888A7AA7-33A23G399DE-7443356756877B5B359E678775C--------511-2763-------------1---11--11-1----1D9L9-6TL9KBCCBEC86776998AAAA868GDQBMMH33AB687697A7DCGJ228----76-------111IA94OCB1----------9B82E131155459724---------------------------441451524543333343333334334355---321-------4333-346446666587-476755575645455655766633543333333333333333373444444--333333333333---2111114444-393411111--11112111CCA9C4877591AAA97A976979D8445111111111-2324222224634444667666781111--12552222--------1--------------------------------------11 ----347-952-4458655878874664533235754A7777743433788AB855454656411-1--11-1-111-11111111---65465435332436537-9C7BAE7676555647565365Ho8-9795352655C423652542945A487AB4G7656378BEB54222c2224497BB4454674557 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 727 STR:RPRED 98.5 SQ:SECSTR cccccEEEEEEETTEEEEEEccGGGcTTcccHHHHHHHHHHHHHHHTcTTccEEEEEEcTTcccccccHHHHHHHHTccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccEEETHHHHHHTTccEEEEETTTTcEEEccGGGGTccccccHHHHGGGTccHHHHHHHHHHccEEEHHHHHHHTcccEEEccHHHHHHHHHHHHTTTcccTTGGGHHHHHHTccccHHHHHHHHccHHHHHHHHHHccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHTccHHHHHHHHHHHccccTHTTccccGGGcccccHHEEEEEcccHHHHHHHHHHHHTTccEEEEcccHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTcccccHHHHHHHHHHHHHHTcccHHHHHHHGGGcccTTTccTTHHHHccEEEEEEEETTEEEEEEEEcccccccccTTccccccccTTTTccccEEEEEEcccccEEEETTccGGccTTEEccGGGGTTEEEcccccHHHHHTTcEEEEcTTcEEEEEEEEccTTcEEccTTccccEEccHHHHHHHHHHHHHHTHTcTTcccccccccccccHHHHcccHHHHHHHHHTcGGGTTccccEEEETTEEEEcccccTTTTTTTTTHHHHHHHHHHHTcccHHHHHHHHHHHHHHTcccccTHHHHHHHHHcGGGcccHHHHTHHHTTcccc########### DISOP:02AL 301-304,377-390,732-732,734-739| PSIPRED ccccEEEEEEEcccEEEEEEcccccccccccHHHHHHHHHHHHHHHcccccEEEEEEcccccEEccccHHHHHcccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHccEEEEEccccEEEEccccccccccccHHHHHHHHHHcHHHHHHHHHccccccHHHHHHcccHHHcccHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccHHHHccccEEEEEccccHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHcccHHHEEEEcccccHHHcEEEEEEccccccHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccccccccccccEEccccccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccccHHHHHHHHcHHHHHHHHHHHHHHccccccccHHHHHHHHccccccccccHHHHHcc //