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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38053.1
DDBJ      :             Cytochrome-c oxidase
Swiss-Prot:             

Homologs  Archaea  26/68 : Bacteria  603/915 : Eukaryota  59/199 : Viruses  0/175   --->[See Alignment]
f.24.1
:541 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   28->539 1qleA PDBj e-174 61.6 %
:RPS:PDB   25->535 1ar1A PDBj 1e-87 40.7 %
:RPS:SCOP  26->535 1ar1A  f.24.1.1 * e-117 55.8 %
:HMM:SCOP  24->543 1ocrA_ f.24.1.1 * 1.3e-221 61.1 %
:RPS:PFM   78->471 PF00115 * COX1 e-127 65.0 %
:HMM:PFM   35->487 PF00115 * COX1 7.1e-178 53.6 442/447  
:BLT:SWISS 23->541 COX1_BRAJA 0.0 89.0 %
:PROS 264->318|PS00077|COX1_CUB
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38053.1 GT:GENE ABE38053.1 GT:PRODUCT Cytochrome-c oxidase GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 919666..921291 GB:FROM 919666 GB:TO 921291 GB:DIRECTION + GB:PRODUCT Cytochrome-c oxidase GB:PROTEIN_ID ABE38053.1 GB:DB_XREF GI:91681751 InterPro:IPR000883 LENGTH 541 SQ:AASEQ MTMEAARVAHSDHAHDDHAHAHPTGWRRYVYSTNHKDIGTMYLIFAIIAGIIGGAMSIAIRIELMYPGVQIFHESHTYNVFVTSHGLIMIFFMVMPAMIGGFGNWFVPLMIGAPDMAFPRMNNVSFWLLPAAFALLLISTFVEGEPSSNGVGAGWTMYAPLSTSGHPGPAVDFAILALHIAGASSILGAINFITTIFNMRAPGMTLHKMPLFVWSILVTVFLLLLSLPVLAGAITMLLTDRNFGTTFFSAEGGGDPLLFQHLFWFFGHPEVYILILPAFGMVSQIVSTFSKKPVFGYLGMAYAMVAIGVIGFVVWAHHMYTVGMSSTTQAYFVAATMVIAVPTGVKIFSWIATMWGGSIEFKTPMLWAVGFIFLFTVGGVTGVVLANAGVDRVLQDTYYVVAHFHYVLSLGAVFGIFAGWYYWFPKMFGYMYSETIGKLHFWVTFIGVNMVFFPQHFLGLSGMPRRYVDYPDAFAGWNLVSSIGSYISGFAVLIFLFGMTLAFIRKEKAADNPWGVGATTLEWTLSSPPPFHQFEVLPQVR GT:EXON 1|1-541:0| BL:SWS:NREP 1 BL:SWS:REP 23->541|COX1_BRAJA|0.0|89.0|519/541| PROS 264->318|PS00077|COX1_CUB|PDOC00074| TM:NTM 12 TM:REGION 44->66| TM:REGION 86->108| TM:REGION 123->145| TM:REGION 173->195| TM:REGION 212->234| TM:REGION 268->290| TM:REGION 295->317| TM:REGION 330->352| TM:REGION 365->387| TM:REGION 401->423| TM:REGION 436->458| TM:REGION 482->504| SEG 5->22|aarvahsdhahddhahah| SEG 44->62|ifaiiagiiggamsiairi| SEG 128->137|llpaafalll| SEG 217->230|lvtvfllllslpvl| SEG 369->390|vgfiflftvggvtgvvlanagv| BL:PDB:NREP 1 BL:PDB:REP 28->539|1qleA|e-174|61.6|510/538| RP:PDB:NREP 1 RP:PDB:REP 25->535|1ar1A|1e-87|40.7|509/529| RP:PFM:NREP 1 RP:PFM:REP 78->471|PF00115|e-127|65.0|386/423|COX1| HM:PFM:NREP 1 HM:PFM:REP 35->487|PF00115|7.1e-178|53.6|442/447|COX1| GO:PFM:NREP 5 GO:PFM GO:0005506|"GO:iron ion binding"|PF00115|IPR000883| GO:PFM GO:0009055|"GO:electron carrier activity"|PF00115|IPR000883| GO:PFM GO:0009060|"GO:aerobic respiration"|PF00115|IPR000883| GO:PFM GO:0016021|"GO:integral to membrane"|PF00115|IPR000883| GO:PFM GO:0020037|"GO:heme binding"|PF00115|IPR000883| RP:SCP:NREP 1 RP:SCP:REP 26->535|1ar1A|e-117|55.8|505/529|f.24.1.1| HM:SCP:REP 24->543|1ocrA_|1.3e-221|61.1|512/514|f.24.1.1|1/1|Cytochrome c oxidase subunit I-like| OP:NHOMO 1200 OP:NHOMOORG 688 OP:PATTERN 11----4333333326-11-2---41131111-----------------------------1----11 1242111111111131111-151121111112322325342342111111111111111122213222223------------1-----------------111111111--------------11----------11111---11132211111112122222212534211111111211211111---22222222222222222222222222212242111111114221111111111111111111--------------------------------------------------------------------------------------------------1---------------------1-21223111111243354112232112212222221335435344421322254335454211112133333121111111112331212-111111111111111111111111-111111112-1443543333432333443666664445546551144422322212151321121121-------1233211-----11-1-111-1-1-1111-222222---------------------------2211131111221112221212222211221211-31-111111111111111111111111-1111111111111111111111111111111111111111111111----111111111111111112111111121122111---------------1111111---2122222322222222111-11111111----2-----221113322222222111111--111111----------------------------------------------22- -2------1-----1------------112-12111-------111-1------111-----4-311---1-----4----------------1---11------2------11111-----1-1--1-14--11-----1--21--------1-1--1----2-112--d-15-1-1-------1--4--1--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 517 STR:RPRED 95.6 SQ:SECSTR ######################cccTTTTTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccTTcccccccccccccccHHHHHHHHHHHHHHHHHHHHTccccccHHHHHHHHHHHHHHHHHHHHHHHcEETTTEEccccTTTTcTTTHGGGccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccTTccGGGccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccTTcGGGTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccTTHHHHHHHHHHHHHHTTccGGGGcGGGTccHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHTTcHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHcEEccHHHHHHHHHHHHHHHHHHHcHHHHHHHTTcccccccccGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEcccccccTTcccGGGTccccccccccccccc## DISOP:02AL 1-10| PSIPRED ccHHHHHHHHccccccccccccccccHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHcccccHHHHHHccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccEEccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccEEEcccHHHHHHHHHHHHHHHHHHHEEEcccccEEEEcccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHccccccccccHHHccccc //