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Rhodopseudomonas palustris BisB5 (rpal2)
Gene : ABE38057.1
DDBJ      :             cytochrome c oxidase, subunit III
Swiss-Prot:             

Homologs  Archaea  19/68 : Bacteria  528/915 : Eukaryota  60/199 : Viruses  0/175   --->[See Alignment]
f.25.1
:284 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->274 1m56C PDBj 3e-84 55.1 %
:RPS:PDB   66->253 2dysC PDBj 6e-26 39.7 %
:RPS:SCOP  4->275 1m56C  f.25.1.1 * 5e-62 56.4 %
:HMM:SCOP  4->275 1m56C_ f.25.1.1 * 1.8e-97 52.3 %
:RPS:PFM   56->271 PF00510 * COX3 1e-52 58.0 %
:HMM:PFM   9->274 PF00510 * COX3 2.7e-109 52.5 257/258  
:BLT:SWISS 6->274 COX3_SOYBN 1e-75 50.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABE38057.1 GT:GENE ABE38057.1 GT:PRODUCT cytochrome c oxidase, subunit III GT:DATABASE GIB00345CH01 GT:ORG rpal2 GB:ACCESSION GIB00345CH01 GB:LOCATION 923196..924050 GB:FROM 923196 GB:TO 924050 GB:DIRECTION + GB:PRODUCT cytochrome c oxidase, subunit III GB:PROTEIN_ID ABE38057.1 GB:DB_XREF GI:91681755 InterPro:IPR000298 LENGTH 284 SQ:AASEQ MATAHAKRHDYHLVDPSPWPFVGSVSAFVMALGAIGWMHNMFQGAPMLFGVGVIGVLYTMASWWSDVIKEAEFQGDHTRVVQISHRYGMILFIASEVMFFVAWFWAFFNSALFPGDPVHATREALFGGVWPPKGIETFDPWHLPLLNTLILLTSGTTVTWAHHALLNNDRKGLKNALILTILLGVTFSFVQAYEYSHASFSFAGNIYGATFFMATGFHGFHVLIGTIFLLVCLIRATKGHFTPTQHLGFEFAAWYWHFVDVVWLFLFVSIYVWGHGASTMAGAH GT:EXON 1|1-284:0| BL:SWS:NREP 1 BL:SWS:REP 6->274|COX3_SOYBN|1e-75|50.4|260/265| TM:NTM 7 TM:REGION 18->40| TM:REGION 45->67| TM:REGION 93->115| TM:REGION 142->164| TM:REGION 172->194| TM:REGION 212->234| TM:REGION 255->276| SEG 97->108|vmffvawfwaff| SEG 143->157|lpllntlilltsgtt| BL:PDB:NREP 1 BL:PDB:REP 4->274|1m56C|3e-84|55.1|263/265| RP:PDB:NREP 1 RP:PDB:REP 66->253|2dysC|6e-26|39.7|179/258| RP:PFM:NREP 1 RP:PFM:REP 56->271|PF00510|1e-52|58.0|207/212|COX3| HM:PFM:NREP 1 HM:PFM:REP 9->274|PF00510|2.7e-109|52.5|257/258|COX3| GO:PFM:NREP 3 GO:PFM GO:0004129|"GO:cytochrome-c oxidase activity"|PF00510|IPR000298| GO:PFM GO:0006123|"GO:mitochondrial electron transport, cytochrome c to oxygen"|PF00510|IPR000298| GO:PFM GO:0016020|"GO:membrane"|PF00510|IPR000298| RP:SCP:NREP 1 RP:SCP:REP 4->275|1m56C|5e-62|56.4|264/265|f.25.1.1| HM:SCP:REP 4->275|1m56C_|1.8e-97|52.3|264/265|f.25.1.1|1/1|Cytochrome c oxidase subunit III-like| OP:NHOMO 841 OP:NHOMOORG 607 OP:PATTERN ------1111111111--1-1---211111-1------------------------------------ -211111111111111111-14111111111121121111111111111111211111111111112111-------------1---------------------111-1--------------11-----------11-------1321111111121212221115331111111112112---11---222111111111111111222222111122-11111111122111111111111111111-1--------------------------------------------------------------------------------------------------1---------------------1--1111-----112112211122133333333332-123113112311322133333333211111121111111--------1---111-111111111111111111111111-111111112-1222422221221111112311111123445441133422122112131311222111-------1232121-----11---11--------1--121111-----------------------------1112113112111222221222211122121--11-1------1111-111111111111-11111111111111111111111111-1111111111111111-11-11111--------------11111111111111111---------------1111111---1122222222122222111----------1--2-----221113322222222111111----1111-----------------------------------------------2- -3------1--------1---------111-11111-------2-1--------121-----1-111---1-----1----------------1---11----111------11111-----1-21-1-15--11-----1--21--------1-1-------1-112--M-111111----------2-1---1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 271 STR:RPRED 95.4 SQ:SECSTR ###cTTccccccccccccHHHHHHHHHHHHHHHHHHHHTTcccccTHHHHHHHHHHHHHHHHHHHHHHHHHTTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccTTTTcGGTTGTcccccTTcccccTTcHHHHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccccccHHHHHHHHHHHHHHHHHHHHHHHHTTTc########## DISOP:02AL 1-6,282-285| PSIPRED ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccHHHccccccccccccccHHHHHHHHHHHHHHcccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccc //